Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.13□□□□□ -1.59
CD40P25942 SNORA17.5-201ENST00000630429 132 ntBASIC5.13□□□□□ -1.59
CD40P25942 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.13□□□□□ -1.59
CD40P25942 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.13□□□□□ -1.59
CD40P25942 OR11H2-202ENST00000641517 1085 ntBASIC5.13□□□□□ -1.59
CD40P25942 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CD40P25942 AL121839.2-201ENST00000565058 6943 ntBASIC5.13□□□□□ -1.59
CD40P25942 AC022034.1-201ENST00000512867 2156 ntBASIC5.13□□□□□ -1.59
CD40P25942 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 HSPA8P14-201ENST00000552265 1805 ntBASIC5.13□□□□□ -1.59
CD40P25942 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 THAP12P9-201ENST00000503971 2360 ntBASIC5.13□□□□□ -1.59
CD40P25942 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 AL137141.1-201ENST00000624622 4836 ntBASIC5.13□□□□□ -1.59
CD40P25942 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CD40P25942 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.13□□□□□ -1.59
CD40P25942 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD40P25942 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.12□□□□□ -1.59
CD40P25942 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.12□□□□□ -1.59
CD40P25942 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.12□□□□□ -1.59
CD40P25942 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 TMSB4XP4-201ENST00000323496 618 ntBASIC5.12□□□□□ -1.59
CD40P25942 OR4G2P-201ENST00000328113 903 ntBASIC5.12□□□□□ -1.59
CD40P25942 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CD40P25942 RNA5SP211-201ENST00000365516 117 ntBASIC5.12□□□□□ -1.59
CD40P25942 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.12□□□□□ -1.59
CD40P25942 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CD40P25942 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC069218.2-201ENST00000411665 344 ntBASIC5.12□□□□□ -1.59
CD40P25942 RPS3AP3-201ENST00000411933 242 ntBASIC5.12□□□□□ -1.59
CD40P25942 OR8G2P-201ENST00000412796 908 ntBASIC5.12□□□□□ -1.59
CD40P25942 RPS4XP5-201ENST00000419038 768 ntBASIC5.12□□□□□ -1.59
CD40P25942 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CD40P25942 ISCA1P1-201ENST00000426679 387 ntBASIC5.12□□□□□ -1.59
CD40P25942 RPS26P47-201ENST00000427219 348 ntBASIC5.12□□□□□ -1.59
CD40P25942 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 RSU1P2-202ENST00000437884 485 ntBASIC5.12□□□□□ -1.59
CD40P25942 SKP1P1-201ENST00000438081 489 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC105402.2-201ENST00000438503 358 ntBASIC5.12□□□□□ -1.59
CD40P25942 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CD40P25942 RPL36AP15-201ENST00000444514 266 ntBASIC5.12□□□□□ -1.59
CD40P25942 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 AC098824.1-201ENST00000453565 980 ntBASIC5.12□□□□□ -1.59
CD40P25942 HIGD1AP8-201ENST00000453927 274 ntBASIC5.12□□□□□ -1.59
CD40P25942 Z82190.1-201ENST00000454534 490 ntBASIC5.12□□□□□ -1.59
CD40P25942 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 snoU13.7-201ENST00000459220 104 ntBASIC5.12□□□□□ -1.59
CD40P25942 GYG1P1-201ENST00000460864 698 ntBASIC5.12□□□□□ -1.59
CD40P25942 UBFD1P1-201ENST00000473259 814 ntBASIC5.12□□□□□ -1.59
CD40P25942 RPL9P6-201ENST00000492764 598 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC090453.1-201ENST00000495560 436 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC105252.1-201ENST00000503089 286 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 SNORA18.6-201ENST00000516792 115 ntBASIC5.12□□□□□ -1.59
CD40P25942 SNORA70.20-201ENST00000516848 126 ntBASIC5.12□□□□□ -1.59
CD40P25942 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.12□□□□□ -1.59
CD40P25942 AC018552.3-201ENST00000567416 561 ntBASIC5.12□□□□□ -1.59
CD40P25942 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 AC012146.2-201ENST00000576545 416 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC090312.1-201ENST00000580637 348 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 AC009977.1-201ENST00000586015 570 ntBASIC5.12□□□□□ -1.59
CD40P25942 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.12□□□□□ -1.59
CD40P25942 OR4G1P-201ENST00000588632 938 ntBASIC5.12□□□□□ -1.59
CD40P25942 MIR132-201ENST00000591554 101 ntBASIC5.12□□□□□ -1.59
CD40P25942 AL022154.1-201ENST00000604698 785 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC090578.1-201ENST00000604955 591 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC145423.1-201ENST00000605712 336 ntBASIC5.12□□□□□ -1.59
CD40P25942 AP002360.4-201ENST00000606980 481 ntBASIC5.12□□□□□ -1.59
CD40P25942 AF250324.2-201ENST00000608299 610 ntBASIC5.12□□□□□ -1.59
CD40P25942 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.12□□□□□ -1.59
CD40P25942 U4.5-201ENST00000617137 123 ntBASIC5.12□□□□□ -1.59
CD40P25942 AC138649.3-201ENST00000622154 254 ntBASIC5.12□□□□□ -1.59
CD40P25942 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.12□□□□□ -1.59
CD40P25942 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 AC009229.4-201ENST00000623854 1947 ntBASIC5.12□□□□□ -1.59
CD40P25942 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CD40P25942 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms