Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL1P09341 AL845331.3-202ENST00000562856 261 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL1P09341 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL1P09341 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL1P09341 AL354984.3-201ENST00000604803 325 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AL450489.1-201ENST00000612071 468 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL1P09341 AL139089.1-201ENST00000620372 975 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AL049536.1-201ENST00000625043 744 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CXCL1P09341 ZNF826P-207ENST00000622273 1910 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CXCL1P09341 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CXCL1P09341 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CXCL1P09341 AC053481.2-202ENST00000582394 1500 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
CXCL1P09341 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CXCL1P09341 CEP170P1-201ENST00000502249 4587 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 AC008033.1-201ENST00000216407 1162 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 RNU1-130P-201ENST00000363930 160 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 SNORD6-201ENST00000365444 73 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 RNU6-225P-201ENST00000384613 103 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CXCL1P09341 AC136624.1-201ENST00000400791 413 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 AIMP1P1-201ENST00000418670 937 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AC114814.2-201ENST00000419195 485 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 CHIAP3-201ENST00000423668 1133 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AC073069.1-201ENST00000428657 441 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 PTMAP6-201ENST00000439110 327 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 SERPINA7P1-201ENST00000443077 631 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL1P09341 RPL7AP52-201ENST00000458096 790 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 RPS29P19-201ENST00000479709 171 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 RN7SKP60-201ENST00000516985 239 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 IGLV2-28-201ENST00000520681 304 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 MTND1P6-201ENST00000523621 946 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AL139174.1-201ENST00000531489 886 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.07□□□□□ -1.92
CXCL1P09341 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL1P09341 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.07□□□□□ -1.92
CXCL1P09341 RPL23AP87-202ENST00000573039 466 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 MIR4489-201ENST00000578869 62 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.07□□□□□ -1.92
CXCL1P09341 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL1P09341 AC113403.1-201ENST00000604910 193 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AC034236.3-201ENST00000605999 461 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 AC100847.1-201ENST00000611316 481 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 FAM27D1-201ENST00000612308 341 ntBASIC3.07□□□□□ -1.92
CXCL1P09341 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL1P09341 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL1P09341 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CXCL1P09341 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.07□□□□□ -1.92
CXCL1P09341 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CXCL1P09341 AL592148.3-201ENST00000608771 2646 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CXCL1P09341 MFSD8-236ENST00000641509 4050 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CXCL1P09341 RNU6-328P-201ENST00000390887 106 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 HLFP1-201ENST00000402375 499 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 RN7SKP106-201ENST00000410832 272 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 SNORA57.3-201ENST00000411095 141 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.06□□□□□ -1.92
CXCL1P09341 LIPT1P1-201ENST00000415870 1186 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 RPL7AP25-201ENST00000423357 805 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AL157831.1-201ENST00000426134 473 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC002069.1-201ENST00000429649 1159 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 ARF4P2-201ENST00000430209 526 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 MTCO3P21-201ENST00000430791 643 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.06□□□□□ -1.92
CXCL1P09341 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.06□□□□□ -1.92
CXCL1P09341 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CXCL1P09341 RNU6-1218P-201ENST00000458990 108 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC010326.1-201ENST00000462726 602 ntBASIC3.06□□□□□ -1.92
CXCL1P09341 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms