Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL23AP24-201ENST00000458203 385 ntBASIC3.76□□□□□ -1.81
SGCEO43556 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 USP9YP5-201ENST00000511770 630 ntBASIC3.76□□□□□ -1.81
SGCEO43556 SEC11B-201ENST00000518383 499 ntBASIC3.76□□□□□ -1.81
SGCEO43556 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SGCEO43556 AC006064.5-201ENST00000541782 248 ntBASIC3.76□□□□□ -1.81
SGCEO43556 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.76□□□□□ -1.81
SGCEO43556 AL109766.1-201ENST00000555080 552 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.76□□□□□ -1.81
SGCEO43556 MIR4458-201ENST00000578872 75 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AC005191.1-201ENST00000603950 358 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AL354984.3-201ENST00000604803 325 ntBASIC3.76□□□□□ -1.81
SGCEO43556 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.76□□□□□ -1.81
SGCEO43556 AL391834.1-201ENST00000609609 560 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AC007546.1-201ENST00000619452 559 ntBASIC3.76□□□□□ -1.81
SGCEO43556 AP000346.3-201ENST00000622821 210 ntBASIC3.76□□□□□ -1.81
SGCEO43556 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SGCEO43556 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SGCEO43556 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SGCEO43556 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.76□□□□□ -1.81
SGCEO43556 AC096656.1-201ENST00000623826 1364 ntBASIC3.76□□□□□ -1.81
SGCEO43556 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 AC092162.3-201ENST00000624511 1624 ntBASIC3.75□□□□□ -1.81
SGCEO43556 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 RN7SKP56-201ENST00000410513 331 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RN7SKP177-201ENST00000410567 355 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RPL23AP26-201ENST00000412728 464 ntBASIC3.75□□□□□ -1.81
SGCEO43556 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.75□□□□□ -1.81
SGCEO43556 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 AC245028.1-201ENST00000423259 256 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RPL23AP52-201ENST00000439311 478 ntBASIC3.75□□□□□ -1.81
SGCEO43556 MTND2P25-201ENST00000449028 610 ntBASIC3.75□□□□□ -1.81
SGCEO43556 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 SBDSP1-204ENST00000453858 737 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RNU7-27P-201ENST00000459281 62 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RN7SL738P-201ENST00000470264 297 ntBASIC3.75□□□□□ -1.81
SGCEO43556 AP000926.1-201ENST00000479573 241 ntBASIC3.75□□□□□ -1.81
SGCEO43556 RPS23P1-201ENST00000491662 432 ntBASIC3.75□□□□□ -1.81
SGCEO43556 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 AC108145.1-201ENST00000503770 153 ntBASIC3.75□□□□□ -1.81
SGCEO43556 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 AC022790.1-201ENST00000522872 204 ntBASIC3.75□□□□□ -1.81
SGCEO43556 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.75□□□□□ -1.81
SGCEO43556 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.75□□□□□ -1.81
SGCEO43556 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 CYP4A43P-201ENST00000568156 121 ntBASIC3.75□□□□□ -1.81
SGCEO43556 MIR4330-201ENST00000579077 105 ntBASIC3.75□□□□□ -1.81
SGCEO43556 AC022884.3-201ENST00000579571 248 ntBASIC3.75□□□□□ -1.81
SGCEO43556 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.75□□□□□ -1.81
SGCEO43556 AC104785.1-201ENST00000603220 588 ntBASIC3.75□□□□□ -1.81
SGCEO43556 AC010857.1-201ENST00000606398 594 ntBASIC3.75□□□□□ -1.81
SGCEO43556 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.75□□□□□ -1.81
SGCEO43556 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SGCEO43556 EIF2AP4-201ENST00000424793 1781 ntBASIC3.75□□□□□ -1.81
SGCEO43556 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.75□□□□□ -1.81
SGCEO43556 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.75□□□□□ -1.81
SGCEO43556 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SGCEO43556 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.75□□□□□ -1.81
SGCEO43556 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SGCEO43556 AC105074.1-201ENST00000623380 3095 ntBASIC3.74□□□□□ -1.81
SGCEO43556 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SGCEO43556 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SGCEO43556 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SGCEO43556 IGKV7-3-201ENST00000357453 298 ntBASIC3.74□□□□□ -1.81
SGCEO43556 RNA5SP322-201ENST00000363617 119 ntBASIC3.74□□□□□ -1.81
SGCEO43556 Z98941.1-201ENST00000407764 100 ntBASIC3.74□□□□□ -1.81
SGCEO43556 MIR1179-201ENST00000408703 91 ntBASIC3.74□□□□□ -1.81
SGCEO43556 RPS27AP7-201ENST00000422792 455 ntBASIC3.74□□□□□ -1.81
SGCEO43556 RPS29P17-201ENST00000430795 166 ntBASIC3.74□□□□□ -1.81
SGCEO43556 OR6C71P-201ENST00000432580 913 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms