Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM1O00151 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AL935212.3-201ENST00000450729 284 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM1O00151 OR7H2P-201ENST00000513483 306 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM1O00151 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AL049870.4-201ENST00000555741 486 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 AC091042.1-201ENST00000579213 173 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM1O00151 SUMO2P14-201ENST00000604488 293 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 OR7A19P-201ENST00000608051 733 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 AC073592.7-201ENST00000623659 507 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 AL356094.1-201ENST00000624663 1212 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.24□□□□□ -1.73
PDLIM1O00151 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM1O00151 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 NXPH1-205ENST00000602349 1953 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM1O00151 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM1O00151 AC135352.1-201ENST00000506173 1418 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC073429.2-201ENST00000569694 1444 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM1O00151 RNA5SP388-201ENST00000362584 119 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM1O00151 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL035419.1-201ENST00000397037 564 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 RN7SKP177-201ENST00000410567 355 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 RNA5SP498-201ENST00000411342 120 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 RSU1P3-201ENST00000412878 835 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 BX510359.2-201ENST00000417920 305 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 USP12PY-201ENST00000427677 1064 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 RPL23AP25-201ENST00000430973 463 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AL356535.1-201ENST00000440335 398 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 RPL36AP15-201ENST00000444514 266 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 OR1H1P-201ENST00000448731 937 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC010733.1-201ENST00000451515 401 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL136097.1-201ENST00000456945 913 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 RNU7-27P-201ENST00000459281 62 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC011005.3-201ENST00000491624 395 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 RPS27AP16-201ENST00000492222 470 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 RNU1-6P-201ENST00000516290 144 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AP001880.2-201ENST00000538233 448 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.23□□□□□ -1.73
PDLIM1O00151 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 ADAD1P2-201ENST00000588476 646 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AC023762.1-201ENST00000603280 584 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC010200.2-201ENST00000605098 235 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 FAM27B-201ENST00000610601 213 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AL713922.2-201ENST00000619384 716 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 AC020978.9-201ENST00000624380 1141 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDLIM1O00151 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AL442639.1-201ENST00000625030 1899 ntBASIC4.23□□□□□ -1.73
PDLIM1O00151 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDLIM1O00151 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.23□□□□□ -1.73
PDLIM1O00151 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PDLIM1O00151 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDLIM1O00151 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PDLIM1O00151 FCF1P5-201ENST00000406490 482 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AL353692.2-201ENST00000407054 335 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.22□□□□□ -1.73
PDLIM1O00151 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 OR2B7P-201ENST00000429302 934 ntBASIC4.22□□□□□ -1.73
PDLIM1O00151 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.22□□□□□ -1.73
PDLIM1O00151 PTP4A1P3-201ENST00000433661 420 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms