Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 OR56B2P-201ENST00000317102 954 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 RNA5SP443-201ENST00000363083 132 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 RNU1-32P-201ENST00000363937 159 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 RNU6-298P-201ENST00000390888 96 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 XKRYP4-201ENST00000414395 483 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC009480.2-201ENST00000422916 432 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 RPS12P10-201ENST00000427031 377 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 XKRYP5-201ENST00000449659 483 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 HMGB1P5-202ENST00000451497 985 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 RPS17P11-201ENST00000474297 293 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AP001207.2-201ENST00000519490 539 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC010376.1-201ENST00000522101 334 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AGGF1P5-201ENST00000567900 919 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC008782.1-201ENST00000603386 430 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC123786.2-201ENST00000603459 275 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AP002802.2-201ENST00000605877 235 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 MIR8069-1-201ENST00000616627 86 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 MIR8069-2-201ENST00000621412 86 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AC010435.1-201ENST00000623353 1177 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AL590396.4-201ENST00000636779 956 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 AL137100.1-201ENST00000556703 1620 ntBASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.89□□□□□ -1.63
SNX9Q9Y5X1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 OR52B1P-201ENST00000316506 909 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 FAR2P2-201ENST00000413041 594 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AL590806.1-201ENST00000415818 853 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 RPL7AP25-201ENST00000423357 805 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 PTP4A1P7-201ENST00000423476 514 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 FAR2P4-202ENST00000425399 584 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 RPL21P43-201ENST00000425440 472 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 RPS27P5-201ENST00000444247 244 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AL157827.1-201ENST00000447622 132 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC008427.1-201ENST00000503102 655 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC098862.1-201ENST00000504991 413 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 MTCYBP19-201ENST00000517463 1124 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 RAB9BP1-201ENST00000519581 626 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC034205.1-201ENST00000520621 638 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AL357094.1-201ENST00000603845 844 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 COX6CP4-201ENST00000605798 228 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AP005019.3-201ENST00000620418 560 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 MIR7641-1-201ENST00000627518 61 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 AC006927.2-201ENST00000639256 389 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 OR6C71P-202ENST00000641886 1107 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 RAD17P1-201ENST00000418130 2042 ntBASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX9Q9Y5X1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms