Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RPL9P21-201ENST00000392269 505 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC005517.2-201ENST00000424673 553 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 FABP5P2-201ENST00000439042 408 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC245291.3-201ENST00000443400 292 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC011742.2-201ENST00000443818 352 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 HMGB1P4-201ENST00000455362 567 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SL83P-201ENST00000468131 297 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SL390P-201ENST00000470634 284 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RPL29P23-201ENST00000486188 442 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RPS4XP14-201ENST00000493072 781 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC093878.1-201ENST00000515630 432 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 RNA5SP278-201ENST00000517055 102 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 SOD1P3-201ENST00000518682 454 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 SUMO2P20-201ENST00000520803 283 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 COPS8P3-201ENST00000526024 482 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AL117187.1-201ENST00000555482 181 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC244034.2-201ENST00000562504 509 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AP001029.3-201ENST00000588063 596 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 uc_338.22-201ENST00000622722 187 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AL450226.2-201ENST00000622913 439 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC135068.12-201ENST00000637370 931 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AC007485.2-201ENST00000623493 1667 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 AP003486.1-201ENST00000525716 3994 ntBASIC6.67□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC067945.1-201ENST00000342609 618 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AL161781.1-201ENST00000354277 403 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 Y_RNA.28-201ENST00000362554 111 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SKP130-201ENST00000364924 301 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 Y_RNA.339-201ENST00000365325 102 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 PPIAP26-201ENST00000377951 522 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 MIR568-201ENST00000385036 95 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 MTCYBP4-201ENST00000401524 249 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AMYP1-201ENST00000440059 1023 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 PMS2P9-201ENST00000441237 515 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 VN1R38P-201ENST00000450265 887 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 DHFRP3-201ENST00000455595 559 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 RPL21P99-201ENST00000480369 423 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 RPL7AP10-201ENST00000481016 791 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC015524.1-201ENST00000491585 472 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC091965.3-201ENST00000506236 208 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 RNU6-988P-201ENST00000519081 107 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 PCNAP4-201ENST00000532690 730 ntBASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHB11Q9Y5F2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms