Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 AC008745.1-201ENST00000604064 271 ntBASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 FAM27D1-201ENST00000612308 341 ntBASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 AL133370.2-201ENST00000619934 439 ntBASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 AL139254.3-201ENST00000641097 674 ntBASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TRAPPC4Q9Y296 AL451142.2-201ENST00000429076 2090 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC074029.4-201ENST00000624796 1859 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 BDP1P-201ENST00000582658 1990 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 OR5T3-201ENST00000303059 1023 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 IGKV7-3-201ENST00000357453 298 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 RNA5SP509-201ENST00000364577 119 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 U3.22-201ENST00000391120 215 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 SNORA11B-201ENST00000408175 129 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC011933.1-201ENST00000413334 321 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AL161631.1-201ENST00000417933 486 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 RPA2P2-201ENST00000419698 796 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 MTND4LP13-201ENST00000425022 298 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC011742.1-201ENST00000431448 434 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 TRIM60P13-201ENST00000432350 1283 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 ATP5HP2-201ENST00000433885 485 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 RPL23AP52-201ENST00000439311 478 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 EIF2S2P2-201ENST00000447161 982 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 MTND3P4-201ENST00000453537 303 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC116533.1-201ENST00000459748 321 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC011276.1-201ENST00000469688 323 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 RN7SL303P-201ENST00000469773 251 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC006463.2-201ENST00000473326 348 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC069499.1-201ENST00000489433 509 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 RPL35P6-201ENST00000490024 372 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC074029.2-201ENST00000551045 634 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC084036.1-201ENST00000609190 508 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC007546.1-201ENST00000619452 559 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC020763.5-201ENST00000623298 430 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AP000756.2-201ENST00000624168 2567 ntBASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRAPPC4Q9Y296 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 MRPS33P4-201ENST00000434892 317 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 RPL12P46-201ENST00000436610 195 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 CBX1P1-201ENST00000440184 427 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 VN1R48P-201ENST00000448149 1036 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC009963.2-201ENST00000453431 138 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC104164.2-201ENST00000496953 495 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC083829.1-201ENST00000503756 657 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 BNIP3P41-201ENST00000503774 571 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 NDUFB4P12-201ENST00000513465 390 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC034205.1-201ENST00000520621 638 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 PSMB7P1-201ENST00000556349 514 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 MIR4277-201ENST00000578298 84 ntBASIC3.85□□□□□ -1.79
TRAPPC4Q9Y296 AC068020.1-201ENST00000594215 661 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms