Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC006455.6-201ENST00000426192 893 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AL358472.1-201ENST00000431295 329 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AF228730.2-201ENST00000438784 848 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC006011.1-201ENST00000442758 349 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 YWHAQP9-201ENST00000445891 512 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC239809.1-201ENST00000450470 217 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC005229.2-201ENST00000456995 399 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 MTND2P28-201ENST00000457540 1044 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 RPL35AP28-201ENST00000459730 331 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC018638.3-201ENST00000461273 132 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 STRADBP1-201ENST00000478954 1281 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 RPL32P9-201ENST00000487963 407 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 RPL23AP72-201ENST00000492447 435 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC111000.3-201ENST00000508057 576 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC008958.1-201ENST00000511047 682 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 RN7SKP92-201ENST00000517266 244 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 CBX3P5-201ENST00000552017 521 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC084757.1-201ENST00000559987 490 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC012417.1-201ENST00000582307 1039 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC013244.1-201ENST00000604279 193 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 HMGB1P50-201ENST00000605814 607 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AL049539.1-201ENST00000611964 459 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 AC016957.2-201ENST00000616998 848 ntBASIC3.86□□□□□ -1.79
VAPAQ9P0L0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
VAPAQ9P0L0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 RPS3AP23-201ENST00000401762 784 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 RPS29P17-201ENST00000430795 166 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 RPS3AP54-201ENST00000435535 734 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AL133477.1-201ENST00000457472 514 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 RPL5P13-201ENST00000462840 709 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC106872.2-201ENST00000494303 480 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AK3P4-201ENST00000504283 583 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC107016.1-201ENST00000550463 337 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC022968.1-201ENST00000567372 442 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 NPM1P45-201ENST00000583151 559 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC020915.5-201ENST00000596836 964 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 MRPS35P3-201ENST00000603189 709 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 MTCO2P22-201ENST00000603246 681 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AL161729.3-201ENST00000603533 673 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AL391834.1-201ENST00000609609 560 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 CFTRP2-201ENST00000634304 199 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 AL139254.3-201ENST00000641097 674 ntBASIC3.85□□□□□ -1.79
VAPAQ9P0L0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VAPAQ9P0L0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms