Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL596275.2-206ENST00000641957 626 ntBASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NCKIPSDQ9NZQ3 AC096656.1-201ENST00000623826 1364 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AL133268.1-201ENST00000405676 1401 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC015813.6-201ENST00000624409 5808 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RNU6-543P-201ENST00000362576 108 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RNU6-304P-201ENST00000364855 107 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RPL7P27-201ENST00000403775 720 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RPL22P18-201ENST00000417197 377 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 QRSL1P2-201ENST00000418582 964 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RPS24P8-201ENST00000431490 402 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RPS29P9-201ENST00000440360 171 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 CR769776.1-201ENST00000441254 787 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RPL34P20-201ENST00000442771 351 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 VN1R25P-201ENST00000443385 738 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 SEPT14P24-201ENST00000447236 180 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 OR52J1P-201ENST00000450596 932 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 VN1R40P-201ENST00000455196 941 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 NAP1L1P3-201ENST00000462291 880 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC022795.1-201ENST00000473808 480 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 TRBV8-2-201ENST00000475637 270 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 RPL7AP10-201ENST00000481016 791 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AP000563.1-201ENST00000490865 758 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC020890.1-201ENST00000491837 504 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC026414.1-201ENST00000504046 698 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC012339.2-201ENST00000523996 453 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC068714.1-201ENST00000559623 800 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 TVP23CP2-201ENST00000571473 623 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AL512782.1-201ENST00000603093 364 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AL391358.1-201ENST00000605342 190 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC019193.2-201ENST00000610012 634 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC021755.4-201ENST00000616620 456 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC139769.3-201ENST00000618383 175 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 MIR7641-1-201ENST00000627518 61 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 AC139713.2-210ENST00000641741 992 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 MAPK10-320ENST00000641462 6696 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 IRF5P1-201ENST00000504852 2164 ntBASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NCKIPSDQ9NZQ3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 SNORA70.10-201ENST00000384515 134 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 MTCO2P31-201ENST00000402702 684 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 RNU4-22P-201ENST00000411058 166 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 RAB28P1-201ENST00000411517 641 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 AC092745.2-202ENST00000411880 369 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 AC119751.6-201ENST00000416712 186 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 TRGV6-201ENST00000417928 299 ntBASIC4.91□□□□□ -1.62
NCKIPSDQ9NZQ3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms