Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC027290.2-201ENST00000623210 18662 ntBASIC4.41□□□□□ -1.7
NXF3Q9H4D5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.41□□□□□ -1.7
NXF3Q9H4D5 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
NXF3Q9H4D5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 SNORD35B-201ENST00000363660 87 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 RAD23BP3-201ENST00000454157 1152 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 OR7L1P-201ENST00000456181 380 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC020593.1-201ENST00000507399 299 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 NPM1P41-201ENST00000512920 831 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 MTND4LP31-201ENST00000514859 294 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC022882.1-201ENST00000532142 501 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 PDCD5P1-201ENST00000543528 309 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 MTATP6P25-201ENST00000574491 261 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 MTND2P13-201ENST00000577438 1039 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 AC055839.1-201ENST00000634467 498 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 ASNSP1-201ENST00000518311 1939 ntBASIC4.4□□□□□ -1.71
NXF3Q9H4D5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.4□□□□□ -1.71
NXF3Q9H4D5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 OR51C1P-202ENST00000641159 1444 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 ASNSP1-204ENST00000641977 1664 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 CYCSP19-201ENST00000411715 316 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 PGBD4P8-201ENST00000412993 562 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC099063.2-201ENST00000446360 662 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC146944.2-203ENST00000502493 354 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC139495.1-202ENST00000513164 354 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 SNORD116-30-201ENST00000516468 85 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 MED28P5-201ENST00000528254 438 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 AC079791.1-201ENST00000605356 973 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
NXF3Q9H4D5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.39□□□□□ -1.71
NXF3Q9H4D5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 OR52B1P-201ENST00000316506 909 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL607077.1-201ENST00000401718 499 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 RPS24P12-201ENST00000402084 394 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 OR6C72P-201ENST00000451403 892 ntBASIC4.38□□□□□ -1.71
NXF3Q9H4D5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.38□□□□□ -1.71
NXF3Q9H4D5 RN7SL542P-201ENST00000467147 294 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms