Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC091046.3-201ENST00000631455 1574 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC004076.2-201ENST00000620532 3323 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AL161901.1-201ENST00000624954 3425 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC027228.2-201ENST00000567141 2154 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC006116.1-201ENST00000587908 2171 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 CLCA3P-203ENST00000490028 2781 ntBASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
LCE3DQ9BYE3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 AC235565.1-201ENST00000456962 1325 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 MTCO1P12-201ENST00000414273 1543 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CTNNA1P1-201ENST00000515849 2728 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 AC123769.1-201ENST00000530992 3192 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 BDP1P-201ENST00000582658 1990 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 AL031119.1-201ENST00000404707 1879 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 MSL3P1-202ENST00000440028 1468 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 AC066616.2-201ENST00000559334 1481 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 FO393411.1-201ENST00000325612 420 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 Y_RNA.28-201ENST00000362554 111 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 RNU4-2-201ENST00000365668 141 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 HEATR5A-201ENST00000382464 507 ntTSL 2 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 RNU6-196P-201ENST00000384315 107 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 RNU6-328P-201ENST00000390887 106 ntBASIC1.91□□□□□ -2.1
LCE3DQ9BYE3 SMARCE1P6-201ENST00000398372 1216 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms