Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PTMAP3-201ENST00000447474 330 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 RPS20P32-201ENST00000456044 356 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 MTND2P33-201ENST00000506452 1031 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC068446.3-201ENST00000555285 382 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC009120.3-201ENST00000563335 499 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC008782.1-201ENST00000603386 430 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC092681.3-201ENST00000609463 678 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL031658.2-201ENST00000616850 651 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL512652.1-201ENST00000619006 500 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL049536.1-201ENST00000625043 744 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 NUP58P1-201ENST00000502546 1738 ntBASIC6.79□□□□□ -1.32
TRAIPQ9BWF2 SAGE4P-201ENST00000442271 3381 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RNA5SP394-201ENST00000364216 119 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RNA5SP122-201ENST00000384457 108 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 MIR323B-201ENST00000385269 82 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RNA5SP251-201ENST00000410614 137 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RNU2-15P-201ENST00000410692 191 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 SPA17P1-201ENST00000416656 452 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AL592293.2-201ENST00000422292 996 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC127537.2-201ENST00000439258 465 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 FAM103A2P-201ENST00000444122 354 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 PDCL3P4-201ENST00000489621 720 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 OR5M14P-201ENST00000506803 618 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RPL37P25-201ENST00000507308 276 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 SNORA18.6-201ENST00000516792 115 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RNU6-714P-201ENST00000516963 103 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 OR5BC1P-201ENST00000529327 739 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RPA2P1-201ENST00000556557 721 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC009977.1-201ENST00000586015 570 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC104687.2-201ENST00000604442 342 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RBM11P1-201ENST00000604951 799 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC090578.1-201ENST00000604955 591 ntBASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
TRAIPQ9BWF2 AC092447.10-201ENST00000620607 1652 ntBASIC6.77□□□□□ -1.32
TRAIPQ9BWF2 AL022393.1-201ENST00000625142 1677 ntBASIC6.77□□□□□ -1.32
TRAIPQ9BWF2 AP005435.3-201ENST00000531260 3198 ntBASIC6.77□□□□□ -1.32
TRAIPQ9BWF2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
TRAIPQ9BWF2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
TRAIPQ9BWF2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 RNA5SP435-201ENST00000364044 108 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 RNU6-297P-201ENST00000384636 107 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 MT-TC-201ENST00000387405 66 ntBASIC6.77□□□□□ -1.33
TRAIPQ9BWF2 AL512422.1-201ENST00000407033 553 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms