Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 AC107982.3-201ENST00000584957 985 ntBASIC5.57□□□□□ -1.52
CCDC7Q96M83 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC7Q96M83 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC7Q96M83 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC7Q96M83 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC7Q96M83 RNA5SP104-201ENST00000410989 118 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 AL121578.1-201ENST00000428051 892 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 GOT2P5-201ENST00000433995 546 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 HMGB3P22-202ENST00000451823 572 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 PRSS3P4-201ENST00000453323 162 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 RPL7P15-201ENST00000461190 712 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 AC092691.2-201ENST00000461787 803 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 AC135999.1-201ENST00000478962 479 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 TRMT10BP1-201ENST00000519377 943 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 SNORA51-201ENST00000606420 132 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 AL354950.1-201ENST00000614150 568 ntBASIC5.56□□□□□ -1.52
CCDC7Q96M83 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC7Q96M83 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC7Q96M83 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
CCDC7Q96M83 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC7Q96M83 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 RPS3AP25-201ENST00000411660 793 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 BX119904.1-201ENST00000432026 348 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 RNU7-157P-201ENST00000459600 66 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC244100.1-202ENST00000621554 382 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC7Q96M83 MIR448-201ENST00000362131 111 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AL691449.1-201ENST00000426570 421 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 YME1L1P1-201ENST00000429435 297 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 VN1R25P-201ENST00000443385 738 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 NOTCH2P1-201ENST00000443481 624 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 RPS17P13-201ENST00000448974 407 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 VN1R40P-201ENST00000455196 941 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC110792.1-201ENST00000491826 472 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 RNU6-1334P-201ENST00000516032 105 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 IGKV2-23-201ENST00000518729 323 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC109635.6-201ENST00000525487 1113 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 CCNG2P1-201ENST00000549521 1000 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 GNRHR2P1-201ENST00000555315 631 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC120057.2-201ENST00000571520 271 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC069200.1-201ENST00000609511 323 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC009237.17-201ENST00000618111 748 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 AC124312.6-202ENST00000623624 418 ntBASIC5.55□□□□□ -1.52
CCDC7Q96M83 LINC01109-201ENST00000603837 3081 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC7Q96M83 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC7Q96M83 DDX18P6-201ENST00000450119 1997 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC7Q96M83 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 Y_RNA.333-201ENST00000365274 102 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC7Q96M83 RNU4-6P-201ENST00000410804 122 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 AC013268.2-201ENST00000420753 337 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC7Q96M83 HNRNPKP5-201ENST00000515300 253 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 PAICSP4-201ENST00000517543 1253 ntBASIC5.54□□□□□ -1.52
CCDC7Q96M83 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms