Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL161909.1-201ENST00000397390 712 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 DUTP5-201ENST00000406790 469 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RNU4-34P-201ENST00000410431 124 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RNU2-42P-201ENST00000410697 113 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 DPPA2P3-201ENST00000411853 655 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 TPT1P2-201ENST00000413105 503 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL139148.1-201ENST00000427122 680 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 MTCO2P16-201ENST00000436962 677 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 TXNP5-201ENST00000441043 315 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL389915.2-201ENST00000454576 441 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 MTCO2P18-201ENST00000457151 658 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RN7SL222P-201ENST00000476452 299 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 ACTG1P13-201ENST00000486987 1043 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL049874.2-201ENST00000492636 288 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC080014.1-201ENST00000496877 1201 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RFPL1S-203ENST00000539579 330 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC007954.1-201ENST00000554198 494 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AF131215.7-201ENST00000602443 707 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL390816.3-201ENST00000604527 1066 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AP005432.2-201ENST00000608162 586 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC126915.2-201ENST00000610957 190 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL133243.1-201ENST00000614487 366 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 RPSAP73-201ENST00000614820 330 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AL136981.2-201ENST00000617319 734 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC018445.2-201ENST00000622987 260 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 CDRT1-208ENST00000630868 794 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 CR381670.1-201ENST00000624291 1693 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 AC002525.1-201ENST00000624392 1622 ntBASIC4.83□□□□□ -1.64
CTHRC1Q96CG8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 NCLP2-201ENST00000416078 1462 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 C4BPAP1-201ENST00000415474 1893 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC109780.1-201ENST00000451768 1344 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC011477.1-204ENST00000623416 1325 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC097461.1-201ENST00000568928 2821 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 RNA5SP223-201ENST00000365174 120 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 MIR600-201ENST00000385007 98 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 RN7SKP273-201ENST00000411392 314 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC010153.1-201ENST00000432862 727 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 KCTD10P1-201ENST00000434203 625 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL590103.1-201ENST00000434488 307 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 MTCYBP39-201ENST00000437562 491 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 RPS27AP15-201ENST00000447672 466 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 COX6CP18-201ENST00000448769 222 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 RPL12P26-201ENST00000452430 487 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC005532.2-201ENST00000467154 373 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC015724.1-201ENST00000478577 156 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC008953.1-201ENST00000497334 318 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 SETP14-201ENST00000497538 873 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC147055.4-201ENST00000504399 745 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC109471.1-201ENST00000511631 612 ntBASIC4.82□□□□□ -1.64
CTHRC1Q96CG8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms