Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 RPS27AP12-201ENST00000429552 465 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL390119.1-201ENST00000440329 312 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC064862.4-201ENST00000442180 334 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 KNOP1P3-201ENST00000446933 426 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 HMGN2P21-201ENST00000447764 270 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL691482.1-201ENST00000453255 87 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL049829.1-201ENST00000465411 156 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC108751.2-201ENST00000469993 231 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 RPS21P4-201ENST00000487122 248 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC008427.1-201ENST00000503102 655 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC092349.1-201ENST00000504903 310 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC025674.1-201ENST00000507074 324 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC048346.1-201ENST00000510247 144 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC006499.4-201ENST00000510947 694 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 RN7SKP70-201ENST00000516655 271 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 RN7SKP260-201ENST00000516907 149 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 OR4A45P-201ENST00000529954 901 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 CYCSP28-201ENST00000534284 321 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC126177.5-201ENST00000549599 178 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 RN7SL802P-201ENST00000577858 299 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC095055.1-201ENST00000603472 1113 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 YWHAQP7-201ENST00000603536 658 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AL009028.1-201ENST00000604895 802 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 EIF3FP1-201ENST00000613970 806 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC121761.2-201ENST00000617300 689 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 U73479.1-201ENST00000618062 168 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC004232.3-201ENST00000622977 525 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 AC010872.1-201ENST00000624225 675 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 SSXP3-201ENST00000442971 1300 ntBASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.36□□□□□ -1.87
LINC01561Q8N1V8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC116096.1-201ENST00000566804 2314 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC008549.2-201ENST00000333482 706 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RNA5SP28-201ENST00000363841 119 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RNU6-115P-201ENST00000364310 107 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RNU6-1226P-201ENST00000384317 107 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RNU6-921P-201ENST00000384361 107 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 MIR649-201ENST00000384843 97 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AL592291.1-201ENST00000403830 352 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 GSTA8P-201ENST00000404253 637 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SNORA77-201ENST00000408716 125 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 RN7SKP293-201ENST00000411389 296 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 DDX39BP1-205ENST00000422507 192 ntBASIC3.35□□□□□ -1.87
LINC01561Q8N1V8 AC005517.2-201ENST00000424673 553 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms