Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
REEP3Q6NUK4 ZNF962P-201ENST00000443465 3140 ntBASIC3.92□□□□□ -1.78
REEP3Q6NUK4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
REEP3Q6NUK4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
REEP3Q6NUK4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.92□□□□□ -1.78
REEP3Q6NUK4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 EIF2AP4-201ENST00000424793 1781 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RN7SKP103-201ENST00000363848 320 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RPS16P5-201ENST00000406501 404 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RPL23AP1-201ENST00000428990 471 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC010683.1-201ENST00000473673 378 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC139783.2-201ENST00000504847 1145 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC018797.3-201ENST00000513388 1241 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC023158.1-201ENST00000561632 1025 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 RPL12P25-202ENST00000598100 674 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC093765.1-201ENST00000603758 881 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC090948.1-201ENST00000607464 549 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AL096803.3-201ENST00000609032 532 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC074276.2-201ENST00000619891 348 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AC116563.2-201ENST00000624751 535 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AP005264.7-201ENST00000625003 745 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 AL355480.1-201ENST00000629041 99 ntBASIC3.91□□□□□ -1.78
REEP3Q6NUK4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
REEP3Q6NUK4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.78
REEP3Q6NUK4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
REEP3Q6NUK4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
REEP3Q6NUK4 RNU1-14P-201ENST00000362759 152 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 MIR323B-201ENST00000385269 82 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AL133270.1-201ENST00000402635 279 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 RN7SKP235-201ENST00000410662 305 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 RNA5SP306-201ENST00000411087 107 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 P2RY10P2-201ENST00000416730 913 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 MTND4P11-201ENST00000417020 1058 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 MFSD13B-201ENST00000420133 1290 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 MTCO1P57-201ENST00000432182 261 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 RPL23AP46-201ENST00000438548 490 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 EEF1A1P1-201ENST00000447052 739 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 RPL7P31-201ENST00000450192 724 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 HMGB1P26-201ENST00000452520 628 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AL121877.1-201ENST00000453704 622 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 MTND2P28-201ENST00000457540 1044 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 RNU6-551P-201ENST00000516661 103 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 RN7SKP92-201ENST00000517266 244 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 IGKV2D-10-201ENST00000520194 281 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 OR5AN2P-201ENST00000534535 896 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 FAM27D1-201ENST00000612308 341 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AC026368.1-201ENST00000614934 690 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 AL445363.3-201ENST00000623080 671 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 CFTRP2-201ENST00000634304 199 ntBASIC3.9□□□□□ -1.79
REEP3Q6NUK4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
REEP3Q6NUK4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms