Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC104629.1-201ENST00000494226 508 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX1Q15475 AC093720.1-201ENST00000505681 714 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC025674.1-201ENST00000507074 324 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AC111000.3-201ENST00000508057 576 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.29□□□□□ -1.72
SIX1Q15475 AC108043.1-201ENST00000512696 574 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 HMGN1P15-201ENST00000513870 295 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 RNU6-1102P-201ENST00000516149 96 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX1Q15475 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.29□□□□□ -1.72
SIX1Q15475 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX1Q15475 AC005242.1-201ENST00000585658 438 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.29□□□□□ -1.72
SIX1Q15475 MTCO2P22-201ENST00000603246 681 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX1Q15475 AL645927.2-201ENST00000618350 349 ntBASIC4.29□□□□□ -1.72
SIX1Q15475 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.29□□□□□ -1.72
SIX1Q15475 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX1Q15475 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX1Q15475 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX1Q15475 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SIX1Q15475 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SIX1Q15475 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 FAM3C2-201ENST00000312214 681 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX1Q15475 RNU1-32P-201ENST00000363937 159 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 RNU6-609P-201ENST00000365459 107 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 RNU6-1176P-201ENST00000390955 107 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 RNA5SP332-201ENST00000391063 115 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX1Q15475 BTF3P9-201ENST00000418784 283 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX1Q15475 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC078857.1-201ENST00000469870 667 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 RPL35P6-201ENST00000490024 372 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX1Q15475 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX1Q15475 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 AC021146.7-201ENST00000509604 775 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 RN7SKP92-201ENST00000517266 244 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 VTA1P2-201ENST00000520205 911 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX1Q15475 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX1Q15475 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.28□□□□□ -1.72
SIX1Q15475 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX1Q15475 DUX4L52-201ENST00000549363 777 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.28□□□□□ -1.72
SIX1Q15475 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC106785.3-201ENST00000564064 847 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC015849.2-201ENST00000605738 409 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX1Q15475 AL163051.2-201ENST00000618976 735 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 AC097460.3-201ENST00000623099 442 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC092159.4-201ENST00000624944 550 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX1Q15475 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX1Q15475 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX1Q15475 AC006971.1-201ENST00000407916 4486 ntBASIC4.28□□□□□ -1.72
SIX1Q15475 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SIX1Q15475 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SIX1Q15475 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX1Q15475 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX1Q15475 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX1Q15475 AL592494.2-201ENST00000425455 1548 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX1Q15475 RAB28P1-201ENST00000411517 641 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX1Q15475 RPL6P29-201ENST00000414863 865 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 CHIAP3-201ENST00000423668 1133 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX1Q15475 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SIX1Q15475 snoU13.1-201ENST00000459157 104 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 RN7SL810P-201ENST00000493031 276 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AC109458.1-201ENST00000508858 316 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 AC122134.1-202ENST00000569111 1201 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AC022655.2-201ENST00000577280 318 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX1Q15475 AL161729.3-201ENST00000603533 673 ntBASIC4.27□□□□□ -1.73
SIX1Q15475 AC008745.1-201ENST00000604064 271 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms