Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDH1Q08174 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDH1Q08174 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDH1Q08174 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 HSPD1P8-201ENST00000400121 1658 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AP000473.2-201ENST00000602659 1537 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AC083837.1-201ENST00000565297 2994 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 Z95114.1-201ENST00000624264 14574 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 Y_RNA.419-201ENST00000384041 102 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC007394.1-201ENST00000421941 531 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDH1Q08174 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 RIMKLBP2-201ENST00000424737 654 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 SAR1AP4-201ENST00000429225 591 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AC022022.1-201ENST00000430304 178 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AL365400.1-201ENST00000431854 640 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 HMGB3P9-201ENST00000441799 583 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 RPL31P15-201ENST00000449770 338 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 RN7SL221P-201ENST00000466190 281 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 OR9A1P-202ENST00000484361 945 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC093664.1-201ENST00000511779 289 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 RN7SKP67-201ENST00000515905 235 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 RNU6-202P-201ENST00000515998 96 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 Vault.3-201ENST00000516676 95 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC105029.1-201ENST00000520250 669 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AC022690.1-201ENST00000526681 550 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 RPA2P3-201ENST00000533268 770 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC005332.4-201ENST00000592752 579 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AL589863.1-201ENST00000595383 631 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AL390877.1-201ENST00000605704 214 ntBASIC6.11□□□□□ -1.43
PCDH1Q08174 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
PCDH1Q08174 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDH1Q08174 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDH1Q08174 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
PCDH1Q08174 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDH1Q08174 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDH1Q08174 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDH1Q08174 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AP002907.1-201ENST00000606361 1430 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC116158.1-201ENST00000560231 2129 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH1Q08174 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 Y_RNA.431-201ENST00000384086 102 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 RPL7P25-201ENST00000404151 721 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH1Q08174 MTATP6P18-201ENST00000417994 673 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH1Q08174 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH1Q08174 OR10T1P-201ENST00000424327 947 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 GAPDHP19-201ENST00000431768 1005 ntBASIC6.1□□□□□ -1.43
PCDH1Q08174 RPS3AP54-201ENST00000435535 734 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms