Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 H2AFZP5-201ENST00000446960 382 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.91□□□□□ -1.62
PTPN9P43378 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.91□□□□□ -1.62
PTPN9P43378 AL445433.1-201ENST00000457507 257 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 RPL7AP52-201ENST00000458096 790 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AC090142.1-201ENST00000465776 462 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AC112206.1-201ENST00000468416 477 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AC021146.5-201ENST00000503544 545 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.91□□□□□ -1.62
PTPN9P43378 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.91□□□□□ -1.62
PTPN9P43378 HMGB1P19-201ENST00000517578 577 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.91□□□□□ -1.62
PTPN9P43378 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN9P43378 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.91□□□□□ -1.62
PTPN9P43378 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.91□□□□□ -1.62
PTPN9P43378 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.91□□□□□ -1.62
PTPN9P43378 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.91□□□□□ -1.62
PTPN9P43378 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.91□□□□□ -1.62
PTPN9P43378 AC023824.3-201ENST00000569003 562 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 MIR4436B2-201ENST00000581415 91 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 MIR4436B1-201ENST00000583272 91 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 IMMP1LP1-201ENST00000605170 488 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AC022106.2-201ENST00000620114 757 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.91□□□□□ -1.62
PTPN9P43378 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTPN9P43378 OR6C71P-202ENST00000641886 1107 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.91□□□□□ -1.62
PTPN9P43378 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN9P43378 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.91□□□□□ -1.62
PTPN9P43378 AC126323.6-202ENST00000568092 3511 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN9P43378 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN9P43378 MTND4P31-201ENST00000425607 1343 ntBASIC4.91□□□□□ -1.62
PTPN9P43378 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN9P43378 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PTPN9P43378 SALL4P2-201ENST00000423288 2910 ntBASIC4.9□□□□□ -1.62
PTPN9P43378 AC010329.2-201ENST00000595195 2737 ntBASIC4.9□□□□□ -1.62
PTPN9P43378 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PTPN9P43378 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
PTPN9P43378 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN9P43378 RNU1-87P-201ENST00000363727 170 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN9P43378 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN9P43378 AL590290.1-201ENST00000405336 380 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 TAF13P2-201ENST00000416876 286 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 FABP7P1-201ENST00000424004 391 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AL590762.4-201ENST00000425885 253 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN9P43378 CDY14P-201ENST00000431260 1014 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC016831.4-201ENST00000438302 307 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 RPS26P2-201ENST00000440331 348 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 CDY12P-201ENST00000440679 1015 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN9P43378 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 CDY13P-201ENST00000445813 1015 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AL591363.1-201ENST00000450091 483 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AC108463.1-201ENST00000450258 347 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 CDY23P-201ENST00000451661 1014 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 RNU7-140P-201ENST00000459546 60 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC091860.1-201ENST00000505723 432 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN9P43378 RN7SKP46-201ENST00000515942 234 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 snoU109.6-201ENST00000516831 118 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 IGKV1-32-201ENST00000519290 311 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC079075.1-201ENST00000559543 878 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.9□□□□□ -1.63
PTPN9P43378 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 CYP2C60P-201ENST00000566088 139 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN9P43378 AC091042.1-201ENST00000579213 173 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 VN1R88P-201ENST00000596787 292 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN9P43378 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC090897.3-201ENST00000636973 1157 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN9P43378 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PTPN9P43378 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PTPN9P43378 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN9P43378 AC096656.1-201ENST00000623826 1364 ntBASIC4.9□□□□□ -1.63
PTPN9P43378 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 AL136164.3-201ENST00000624429 3978 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 MFSD8-220ENST00000641243 1422 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN9P43378 AC092079.1-201ENST00000558620 1985 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms