Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCL3L1P16619 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCL3L1P16619 MAPK10-253ENST00000641010 4072 ntBASIC3.17□□□□□ -1.9
CCL3L1P16619 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCL3L1P16619 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCL3L1P16619 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.17□□□□□ -1.9
CCL3L1P16619 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCL3L1P16619 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CCL3L1P16619 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
CCL3L1P16619 MIR199A2-201ENST00000385289 110 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL3L1P16619 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 AC069499.1-201ENST00000489433 509 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AL139099.1-201ENST00000497398 403 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL3L1P16619 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CCL3L1P16619 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.16□□□□□ -1.9
CCL3L1P16619 RNA5SP208-201ENST00000516156 78 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL3L1P16619 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL3L1P16619 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL3L1P16619 AC090312.1-201ENST00000580637 348 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AP003392.5-201ENST00000607857 415 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.16□□□□□ -1.9
CCL3L1P16619 AC026368.1-201ENST00000614934 690 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 CDRT1-208ENST00000630868 794 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 ATE1-AS1-202ENST00000636460 506 ntBASIC3.16□□□□□ -1.9
CCL3L1P16619 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL3L1P16619 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.16□□□□□ -1.9
CCL3L1P16619 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCL3L1P16619 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCL3L1P16619 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCL3L1P16619 OR4G1P-202ENST00000641173 1788 ntBASIC3.15□□□□□ -1.9
CCL3L1P16619 AC011503.2-201ENST00000594230 1500 ntBASIC3.15□□□□□ -1.9
CCL3L1P16619 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.15□□□□□ -1.9
CCL3L1P16619 BDP1P-201ENST00000582658 1990 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCL3L1P16619 RN7SKP280-201ENST00000364196 304 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.15□□□□□ -1.91
CCL3L1P16619 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 HMGB3P22-202ENST00000451823 572 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCL3L1P16619 STRADBP1-201ENST00000478954 1281 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 RPS26P15-201ENST00000488067 348 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 PPM1AP1-201ENST00000502740 1135 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 RAC1P2-201ENST00000511164 579 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC108043.1-201ENST00000512696 574 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 NPM1P41-201ENST00000512920 831 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 RNU6-964P-201ENST00000516524 69 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL3L1P16619 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC090877.1-201ENST00000561418 344 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 HSPE1P5-201ENST00000561489 272 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 MIR5685-201ENST00000579080 79 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL3L1P16619 OR1AB1P-201ENST00000585564 761 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AC099669.2-201ENST00000616549 437 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 AC074140.1-201ENST00000621617 208 ntBASIC3.15□□□□□ -1.91
CCL3L1P16619 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CCL3L1P16619 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL3L1P16619 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL3L1P16619 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CCL3L1P16619 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCL3L1P16619 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms