Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MARK2P15-201ENST00000432204 2186 ntBASIC3.7□□□□□ -1.82
HLA-DPB1P04440 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
HLA-DPB1P04440 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RNU1-32P-201ENST00000363937 159 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC083799.1-201ENST00000366451 910 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 SNORA11F-201ENST00000408237 128 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 PGBD4P8-201ENST00000412993 562 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RPS29P17-201ENST00000430795 166 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RPS3AP54-201ENST00000435535 734 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC034244.2-201ENST00000514668 858 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RNU6-491P-201ENST00000516099 110 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RAB9BP1-201ENST00000519581 626 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC090515.3-201ENST00000560431 315 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 MIR5096-201ENST00000583713 70 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC245128.3-201ENST00000594721 748 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC090953.1-201ENST00000604305 1092 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AL356218.2-201ENST00000605264 187 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC005021.1-201ENST00000608730 355 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 AC020763.5-201ENST00000623298 430 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 RPL23AP61-201ENST00000623642 466 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 NCAPGP1-201ENST00000505112 1814 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 IPO8P1-201ENST00000455509 3109 ntBASIC3.69□□□□□ -1.82
HLA-DPB1P04440 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DPB1P04440 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AL034374.1-201ENST00000406329 351 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AMZ2P2-201ENST00000406819 1057 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 RPL12P34-201ENST00000424532 479 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 CACYBPP1-201ENST00000438592 684 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AL512326.1-201ENST00000443050 721 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 VN1R25P-201ENST00000443385 738 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 VN1R40P-201ENST00000455196 941 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 RPL36AP13-201ENST00000457490 317 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 RPS29P19-201ENST00000479709 171 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC025674.1-201ENST00000507074 324 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC093840.1-201ENST00000511599 336 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 SNORA48.9-201ENST00000516419 162 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC009643.1-201ENST00000532030 391 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 NPM1P35-201ENST00000533043 868 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC107918.3-201ENST00000533272 382 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC141257.3-201ENST00000572906 215 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC015911.5-201ENST00000587076 451 ntBASIC3.68□□□□□ -1.82
HLA-DPB1P04440 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DPB1P04440 AC023813.4-201ENST00000607580 580 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms