Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBP04114 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
APOBP04114 RNA5SP97-201ENST00000365006 84 ntBASIC2.35□□□□□ -2.03
APOBP04114 MIR199A2-201ENST00000385289 110 ntBASIC2.35□□□□□ -2.03
APOBP04114 RPS29P4-201ENST00000414733 161 ntBASIC2.35□□□□□ -2.03
APOBP04114 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 PHBP14-201ENST00000512887 367 ntBASIC2.35□□□□□ -2.03
APOBP04114 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 UBE2NP1-201ENST00000545592 458 ntBASIC2.35□□□□□ -2.03
APOBP04114 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBP04114 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBP04114 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.35□□□□□ -2.03
APOBP04114 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 SNRPCP3-201ENST00000474888 476 ntBASIC2.35□□□□□ -2.03
APOBP04114 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 AC097462.2-201ENST00000504623 481 ntBASIC2.35□□□□□ -2.03
APOBP04114 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 MIR5004-201ENST00000579078 107 ntBASIC2.35□□□□□ -2.03
APOBP04114 TUG1_1.1-201ENST00000610654 145 ntBASIC2.35□□□□□ -2.03
APOBP04114 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 HSPD1P14-201ENST00000432666 1618 ntBASIC2.35□□□□□ -2.03
APOBP04114 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBP04114 USP9YP36-201ENST00000424581 829 ntBASIC2.35□□□□□ -2.03
APOBP04114 AL591419.1-201ENST00000427423 339 ntBASIC2.35□□□□□ -2.03
APOBP04114 AL160175.1-201ENST00000428124 247 ntBASIC2.35□□□□□ -2.03
APOBP04114 USP9YP31-201ENST00000431405 881 ntBASIC2.35□□□□□ -2.03
APOBP04114 AC010342.1-201ENST00000514047 877 ntBASIC2.35□□□□□ -2.03
APOBP04114 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.35□□□□□ -2.03
APOBP04114 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.35□□□□□ -2.03
APOBP04114 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
APOBP04114 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
APOBP04114 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
APOBP04114 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC2.35□□□□□ -2.03
APOBP04114 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
APOBP04114 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.34□□□□□ -2.03
APOBP04114 AC138409.2-202ENST00000507274 458 ntBASIC2.34□□□□□ -2.03
APOBP04114 IGKV1OR2-1-201ENST00000514060 354 ntBASIC2.34□□□□□ -2.03
APOBP04114 NCAPGP2-201ENST00000557911 754 ntBASIC2.34□□□□□ -2.03
APOBP04114 BDH2P1-201ENST00000602288 736 ntBASIC2.34□□□□□ -2.03
APOBP04114 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
APOBP04114 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 AC010168.2-201ENST00000562691 5428 ntBASIC2.34□□□□□ -2.03
APOBP04114 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.34□□□□□ -2.03
APOBP04114 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.34□□□□□ -2.03
APOBP04114 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.34□□□□□ -2.03
APOBP04114 OR5M7P-201ENST00000526140 972 ntBASIC2.34□□□□□ -2.03
APOBP04114 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.34□□□□□ -2.03
APOBP04114 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.34□□□□□ -2.03
APOBP04114 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.34□□□□□ -2.03
APOBP04114 AC034105.3-201ENST00000565294 442 ntBASIC2.34□□□□□ -2.03
APOBP04114 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
APOBP04114 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
APOBP04114 BBX-203ENST00000402543 3980 ntTSL 5 BASIC2.34□□□□□ -2.03
APOBP04114 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 AL117339.4-201ENST00000608335 7063 ntBASIC2.34□□□□□ -2.04
APOBP04114 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
APOBP04114 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 RNA5SP80-201ENST00000410475 111 ntBASIC2.34□□□□□ -2.04
APOBP04114 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC2.34□□□□□ -2.04
APOBP04114 AC005019.1-201ENST00000436455 431 ntBASIC2.34□□□□□ -2.04
APOBP04114 AC091862.1-201ENST00000438016 1100 ntBASIC2.34□□□□□ -2.04
APOBP04114 AL645931.1-201ENST00000439737 410 ntBASIC2.34□□□□□ -2.04
APOBP04114 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
APOBP04114 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.34□□□□□ -2.04
APOBP04114 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC2.34□□□□□ -2.04
APOBP04114 AC092435.3-201ENST00000565538 3654 ntBASIC2.34□□□□□ -2.04
APOBP04114 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
APOBP04114 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
APOBP04114 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
APOBP04114 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.34□□□□□ -2.04
APOBP04114 S100A11P2-201ENST00000467589 312 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms