Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC211433.2-201ENST00000608433 387 ntBASIC5.67□□□□□ -1.5
PRPF3O43395 BNIP3P41-202ENST00000616656 861 ntBASIC5.67□□□□□ -1.5
PRPF3O43395 AL022401.1-201ENST00000619498 108 ntBASIC5.67□□□□□ -1.5
PRPF3O43395 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF3O43395 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF3O43395 AC104260.2-201ENST00000623551 3497 ntBASIC5.67□□□□□ -1.5
PRPF3O43395 AP005901.5-201ENST00000545779 1796 ntBASIC5.67□□□□□ -1.5
PRPF3O43395 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF3O43395 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
PRPF3O43395 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF3O43395 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF3O43395 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF3O43395 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC099654.2-201ENST00000433031 1980 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 RNU6-560P-201ENST00000364007 108 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PRPF3O43395 SFR1P1-201ENST00000403720 688 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 RN7SKP199-201ENST00000410325 305 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AL450992.3-201ENST00000413192 568 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC107081.1-201ENST00000414975 361 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 KRR1P1-201ENST00000419430 803 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 OR2AM1P-201ENST00000422137 422 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.66□□□□□ -1.5
PRPF3O43395 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC092162.1-201ENST00000432828 434 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 PRPF38AP2-201ENST00000438179 851 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC112498.1-201ENST00000444401 332 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC012512.1-201ENST00000446594 718 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 MTCO2P25-201ENST00000447065 681 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 snoU13.20-201ENST00000459180 104 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 MTND6P6-201ENST00000478031 263 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 BOLA3P3-201ENST00000505182 232 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
PRPF3O43395 RPL7L1P13-201ENST00000511702 739 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC112673.1-201ENST00000513168 575 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC092593.2-201ENST00000513866 913 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 RFPL4AP5-201ENST00000514977 504 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC092747.2-201ENST00000545069 983 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.66□□□□□ -1.5
PRPF3O43395 AC074029.1-201ENST00000552531 1044 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 SETP1-201ENST00000556014 845 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF3O43395 MIR4646-201ENST00000580775 63 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC011487.3-201ENST00000593607 453 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC245036.5-201ENST00000596330 847 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 AC020910.3-201ENST00000603701 874 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 AC022509.4-201ENST00000621404 572 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 CR381572.2-201ENST00000624852 397 ntBASIC5.66□□□□□ -1.5
PRPF3O43395 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PRPF3O43395 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF3O43395 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.65□□□□□ -1.5
PRPF3O43395 XPOTP1-201ENST00000443317 2398 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.65□□□□□ -1.5
PRPF3O43395 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF3O43395 RNU6-839P-201ENST00000363347 108 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 SNORA51.8-201ENST00000384234 132 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.65□□□□□ -1.5
PRPF3O43395 CTSL3P-202ENST00000412179 788 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 ELOCP9-201ENST00000418624 239 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.65□□□□□ -1.5
PRPF3O43395 AC092393.1-201ENST00000439625 742 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.65□□□□□ -1.5
PRPF3O43395 PTENP1-201ENST00000447117 1215 ntBASIC5.65□□□□□ -1.5
PRPF3O43395 HMGN3P1-201ENST00000453847 193 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms