Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 MIR4277-201ENST00000578298 84 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 MIR4715-201ENST00000584117 79 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AC068620.3-201ENST00000602749 560 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AP003117.1-201ENST00000602771 554 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AC006946.3-201ENST00000609791 756 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AC008759.3-201ENST00000613300 508 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 LINC00901.1-201ENST00000617252 152 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 CASC19-204ENST00000641001 2055 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AL445487.1-201ENST00000415694 1580 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AL672167.1-204ENST00000641875 3017 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 Z95327.2-201ENST00000414579 1873 ntBASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NPIPA3F8WFD2 PHKBP1-201ENST00000450951 1951 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RNU6-468P-201ENST00000384003 109 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RNU6-1176P-201ENST00000390955 107 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AL355615.1-201ENST00000406187 641 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AL645608.4-201ENST00000423619 154 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC000374.1-201ENST00000434698 1745 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AL645931.1-201ENST00000439737 410 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC092170.1-201ENST00000440211 356 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC079168.2-201ENST00000453977 416 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RNA5SP103-201ENST00000459503 118 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RN7SL385P-201ENST00000468873 276 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RPL23AP71-201ENST00000470966 469 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RPS17P11-201ENST00000474297 293 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC020890.1-201ENST00000491837 504 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC104108.1-201ENST00000509930 412 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC010476.1-201ENST00000519111 851 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC093875.1-201ENST00000623688 504 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 AC139713.2-214ENST00000642059 1811 ntBASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPIPA3F8WFD2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 AC108751.5-201ENST00000492880 1336 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 AC090971.4-201ENST00000560291 1800 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 AC008549.2-201ENST00000333482 706 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 SNORA71.2-201ENST00000364941 134 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 AC019155.1-201ENST00000382242 574 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 RNU6-146P-201ENST00000384602 108 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 HMGB3P19-201ENST00000403971 560 ntBASIC4.24□□□□□ -1.73
NPIPA3F8WFD2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms