Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC027287.1-201ENST00000553115 1453 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC083899.2-201ENST00000423285 1376 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC017007.4-201ENST00000503353 1352 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL929601.4-201ENST00000613011 1341 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL627171.1-201ENST00000618845 1308 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP283-201ENST00000365604 119 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC019155.1-201ENST00000382242 574 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL117339.2-201ENST00000430475 180 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 SNRPFP2-201ENST00000440710 251 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL606490.8-201ENST00000441624 319 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 CDC27P1-201ENST00000445384 715 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 HMGB1P16-201ENST00000447155 540 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC239798.3-201ENST00000454459 408 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RPL23AP71-201ENST00000470966 469 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RN7SL132P-201ENST00000478131 296 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 IGKV2-38-201ENST00000517443 247 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 HMGB1P23-201ENST00000518743 568 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 HMGB3P26-201ENST00000560051 582 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC106785.1-201ENST00000565935 262 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 MIR4286-201ENST00000580651 93 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC093227.2-201ENST00000589357 285 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL139286.1-201ENST00000604465 483 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL109618.2-201ENST00000605527 211 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC128687.2-201ENST00000609657 566 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL450326.2-201ENST00000421913 1962 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 LINC02471-203ENST00000641941 4752 ntBASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV4S1A1TA0A5B7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.28□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.28□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 HSPD1P11-201ENST00000508643 1702 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MAPK10-373ENST00000641983 6772 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RNA5SP130-201ENST00000364431 114 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SNORA37-201ENST00000384504 129 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ENSAP1-201ENST00000392855 326 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PTP4A1P1-201ENST00000420539 515 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 FCF1P7-201ENST00000451185 558 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RPL36AP13-201ENST00000457490 317 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC098583.1-201ENST00000480875 255 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 UBA52P3-201ENST00000491303 382 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SL604P-201ENST00000492589 296 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 NDUFB4P12-201ENST00000513465 390 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MTCYBP19-201ENST00000517463 1124 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 RN7SL600P-201ENST00000581811 299 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC068020.1-201ENST00000594215 661 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC020914.4-201ENST00000597690 277 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC104662.1-201ENST00000604448 511 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC099676.1-201ENST00000608886 657 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MIR6867-201ENST00000610636 67 ntBASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TCRBV4S1A1TA0A5B7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AL356489.2-201ENST00000566968 3528 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 OR11H4-201ENST00000315409 1082 ntBASIC3.26□□□□□ -1.89
TCRBV4S1A1TA0A5B7 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms