Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC141586.3-201ENST00000562166 1838 ntBASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 TEX21P-204ENST00000641479 1693 ntBASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 HTR7P1-201ENST00000538670 1336 ntBASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 LINC01465-201ENST00000408887 1940 ntBASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGC3Q9UN70 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 RARRES2P10-201ENST00000564312 460 ntBASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 AL445675.2-201ENST00000620291 557 ntBASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDHGC3Q9UN70 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 NIFKP9-201ENST00000419265 221 ntBASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 GCSHP5-201ENST00000443090 522 ntBASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 FAM197Y4-202ENST00000622692 608 ntBASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCDHGC3Q9UN70 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 AL353807.1-201ENST00000427475 662 ntBASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 AC142381.4-202ENST00000563973 229 ntBASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHGC3Q9UN70 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHGC3Q9UN70 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms