Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HACD3Q9P035 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HACD3Q9P035 KRT18P29-201ENST00000397031 1267 ntBASIC19.6■□□□□ 0.73
HACD3Q9P035 KRASP1-201ENST00000407852 552 ntBASIC19.6■□□□□ 0.73
HACD3Q9P035 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HACD3Q9P035 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.6■□□□□ 0.73
HACD3Q9P035 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.6■□□□□ 0.73
HACD3Q9P035 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HACD3Q9P035 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.6■□□□□ 0.73
HACD3Q9P035 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
HACD3Q9P035 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HACD3Q9P035 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HACD3Q9P035 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HACD3Q9P035 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.6■□□□□ 0.73
HACD3Q9P035 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.6■□□□□ 0.73
HACD3Q9P035 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.59■□□□□ 0.73
HACD3Q9P035 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.59■□□□□ 0.73
HACD3Q9P035 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.59■□□□□ 0.73
HACD3Q9P035 AC124016.1-201ENST00000609552 612 ntBASIC19.59■□□□□ 0.73
HACD3Q9P035 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.59■□□□□ 0.73
HACD3Q9P035 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HACD3Q9P035 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HACD3Q9P035 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HACD3Q9P035 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HACD3Q9P035 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HACD3Q9P035 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.58■□□□□ 0.73
HACD3Q9P035 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
HACD3Q9P035 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HACD3Q9P035 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
HACD3Q9P035 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HACD3Q9P035 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.58■□□□□ 0.72
HACD3Q9P035 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HACD3Q9P035 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.58■□□□□ 0.72
HACD3Q9P035 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.58■□□□□ 0.72
HACD3Q9P035 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
HACD3Q9P035 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.58■□□□□ 0.72
HACD3Q9P035 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HACD3Q9P035 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HACD3Q9P035 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.58■□□□□ 0.72
HACD3Q9P035 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HACD3Q9P035 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HACD3Q9P035 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HACD3Q9P035 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HACD3Q9P035 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
HACD3Q9P035 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HACD3Q9P035 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HACD3Q9P035 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.57■□□□□ 0.72
HACD3Q9P035 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.57■□□□□ 0.72
HACD3Q9P035 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
HACD3Q9P035 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HACD3Q9P035 AC110285.5-201ENST00000611501 352 ntBASIC19.57■□□□□ 0.72
HACD3Q9P035 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HACD3Q9P035 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.57■□□□□ 0.72
HACD3Q9P035 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HACD3Q9P035 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.57■□□□□ 0.72
HACD3Q9P035 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HACD3Q9P035 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
HACD3Q9P035 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.56■□□□□ 0.72
HACD3Q9P035 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 KRT16P5-201ENST00000455284 522 ntBASIC19.56■□□□□ 0.72
HACD3Q9P035 C1QBPP2-201ENST00000528754 825 ntBASIC19.56■□□□□ 0.72
HACD3Q9P035 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.56■□□□□ 0.72
HACD3Q9P035 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HACD3Q9P035 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
HACD3Q9P035 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HACD3Q9P035 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HACD3Q9P035 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms