Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 AC011498.5-201ENST00000592027 486 ntBASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 AL121672.3-201ENST00000608644 468 ntBASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 AC016734.2-201ENST00000624325 1377 ntBASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TFCP2L1Q9NZI6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TFCP2L1Q9NZI6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 KRT8P41-201ENST00000533985 1514 ntBASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 AC092597.1-201ENST00000487352 616 ntBASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 IFNL4P1-201ENST00000607083 540 ntBASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.61■■□□□ 1.53
TFCP2L1Q9NZI6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 EMBP1-201ENST00000458200 901 ntBASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TFCP2L1Q9NZI6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 NUS1P1-201ENST00000446295 882 ntBASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 AL031008.1-201ENST00000619963 541 ntBASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 BX119927.1-201ENST00000636596 1552 ntBASIC24.59■■□□□ 1.53
TFCP2L1Q9NZI6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 AP002383.4-201ENST00000442518 975 ntBASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.58■■□□□ 1.53
TFCP2L1Q9NZI6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms