Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPF1Q9NWY4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.96■□□□□ 0.47
HPF1Q9NWY4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 NUDT16P1-203ENST00000513809 620 ntBASIC17.96■□□□□ 0.47
HPF1Q9NWY4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 AC073912.3-201ENST00000624414 853 ntBASIC17.96■□□□□ 0.47
HPF1Q9NWY4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPF1Q9NWY4 AC009237.14-201ENST00000609975 1594 ntBASIC17.96■□□□□ 0.46
HPF1Q9NWY4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 AL355075.4-201ENST00000554988 638 ntBASIC17.95■□□□□ 0.46
HPF1Q9NWY4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 AL445675.2-201ENST00000620291 557 ntBASIC17.95■□□□□ 0.46
HPF1Q9NWY4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HPF1Q9NWY4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 BX088651.1-201ENST00000540551 451 ntBASIC17.94■□□□□ 0.46
HPF1Q9NWY4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 AL031985.4-201ENST00000642138 673 ntBASIC17.94■□□□□ 0.46
HPF1Q9NWY4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 KRT8P8-201ENST00000434750 1448 ntBASIC17.94■□□□□ 0.46
HPF1Q9NWY4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HPF1Q9NWY4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 AL020996.1-203ENST00000536896 2307 ntBASIC17.93■□□□□ 0.46
HPF1Q9NWY4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.93■□□□□ 0.46
HPF1Q9NWY4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms