Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX47Q9H0S4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 ZNF815P-204ENST00000434898 1737 ntBASIC20.19■□□□□ 0.82
DDX47Q9H0S4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX47Q9H0S4 LETM1P2-201ENST00000597330 2178 ntBASIC20.18■□□□□ 0.82
DDX47Q9H0S4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 AC087623.3-201ENST00000607047 1098 ntBASIC20.18■□□□□ 0.82
DDX47Q9H0S4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX47Q9H0S4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 KRT18P5-201ENST00000436075 1291 ntBASIC20.17■□□□□ 0.82
DDX47Q9H0S4 AC093787.1-201ENST00000450396 207 ntBASIC20.17■□□□□ 0.82
DDX47Q9H0S4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DDX47Q9H0S4 TFP1-202ENST00000475455 1573 ntBASIC20.17■□□□□ 0.82
DDX47Q9H0S4 WIZP1-201ENST00000531444 2299 ntBASIC20.16■□□□□ 0.82
DDX47Q9H0S4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 AC005332.8-201ENST00000622750 2735 ntBASIC20.16■□□□□ 0.82
DDX47Q9H0S4 FP475955.4-201ENST00000623131 1990 ntBASIC20.16■□□□□ 0.82
DDX47Q9H0S4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.16■□□□□ 0.82
DDX47Q9H0S4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 OR10C1-204ENST00000622521 1039 ntBASIC20.16■□□□□ 0.82
DDX47Q9H0S4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.16■□□□□ 0.82
DDX47Q9H0S4 AC018470.1-201ENST00000624790 3129 ntBASIC20.16■□□□□ 0.82
DDX47Q9H0S4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DDX47Q9H0S4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms