Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 UNC93B7-201ENST00000509439 705 ntBASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2OQ9C0C9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
UBE2OQ9C0C9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
UBE2OQ9C0C9 AC121338.2-201ENST00000622535 1744 ntBASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 AC073130.3-201ENST00000624389 2278 ntBASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 AL391422.3-201ENST00000603791 2761 ntBASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 AC009078.2-202ENST00000463353 338 ntBASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.35■■□□□ 1.01
UBE2OQ9C0C9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 AP000523.1-201ENST00000398242 1049 ntBASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 HYMAI.1-201ENST00000620949 238 ntBASIC21.34■■□□□ 1.01
UBE2OQ9C0C9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms