Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 LINC01311-201ENST00000565162 1445 ntBASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 AP000523.1-201ENST00000398242 1049 ntBASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC092119.3-201ENST00000612618 583 ntBASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP4-1Q9BYQ7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 STARP1-201ENST00000397973 869 ntBASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 ATP5G2P1-201ENST00000433580 426 ntBASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 PVRIG2P-201ENST00000435460 978 ntBASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 AP000347.1-202ENST00000435868 847 ntBASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
KRTAP4-1Q9BYQ7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms