Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL25A1Q9BXS0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL25A1Q9BXS0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 AC092474.2-201ENST00000424288 719 ntBASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 AC090616.6-201ENST00000582640 721 ntBASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL25A1Q9BXS0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 IGHV3-41-201ENST00000613121 348 ntBASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 AC063926.2-201ENST00000623766 1308 ntBASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL25A1Q9BXS0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 AC022494.1-201ENST00000466044 728 ntBASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
COL25A1Q9BXS0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.71■□□□□ 0.74
COL25A1Q9BXS0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 AC004832.2-201ENST00000426397 482 ntBASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 AC034105.1-201ENST00000563488 319 ntBASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 AC138761.1-201ENST00000584393 385 ntBASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL25A1Q9BXS0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL25A1Q9BXS0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms