Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AC026185.1-201ENST00000445748 174 ntBASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AC006970.2-201ENST00000450065 779 ntBASIC11.53□□□□□ -0.56
LIMD2Q9BT23 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AF201337.1-201ENST00000520239 748 ntBASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AC023632.3-201ENST00000521633 145 ntBASIC11.53□□□□□ -0.56
LIMD2Q9BT23 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 MAZ-216ENST00000616501 991 ntTSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LIMD2Q9BT23 AC099778.1-201ENST00000568593 1911 ntBASIC11.52□□□□□ -0.56
LIMD2Q9BT23 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LIMD2Q9BT23 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 SLC29A4P1-201ENST00000398760 971 ntBASIC11.52□□□□□ -0.57
LIMD2Q9BT23 AL390719.1-204ENST00000412397 1219 ntBASIC11.52□□□□□ -0.57
LIMD2Q9BT23 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 AC073111.5-205ENST00000641717 521 ntBASIC11.52□□□□□ -0.57
LIMD2Q9BT23 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC11.52□□□□□ -0.57
LIMD2Q9BT23 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 TNXA-203ENST00000507684 2038 ntBASIC11.52□□□□□ -0.57
LIMD2Q9BT23 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LIMD2Q9BT23 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 AL032819.2-201ENST00000624543 2162 ntBASIC11.51□□□□□ -0.57
LIMD2Q9BT23 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 TMEM179-206ENST00000616017 1645 ntBASIC11.51□□□□□ -0.57
LIMD2Q9BT23 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 MIR663A-201ENST00000385250 93 ntBASIC11.51□□□□□ -0.57
LIMD2Q9BT23 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 AC004911.1-201ENST00000416316 871 ntBASIC11.51□□□□□ -0.57
LIMD2Q9BT23 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 C2orf69P4-201ENST00000565394 541 ntBASIC11.51□□□□□ -0.57
LIMD2Q9BT23 AC105036.2-201ENST00000569468 176 ntBASIC11.51□□□□□ -0.57
LIMD2Q9BT23 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC11.51□□□□□ -0.57
LIMD2Q9BT23 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms