Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SPENQ96T58 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPENQ96T58 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.53■□□□□ 0.4
SPENQ96T58 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.53■□□□□ 0.4
SPENQ96T58 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SPENQ96T58 TSPY17P-201ENST00000450329 467 ntBASIC17.53■□□□□ 0.4
SPENQ96T58 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.53■□□□□ 0.4
SPENQ96T58 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.53■□□□□ 0.4
SPENQ96T58 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPENQ96T58 AC141257.4-201ENST00000634557 245 ntBASIC17.53■□□□□ 0.4
SPENQ96T58 AC136944.6-201ENST00000634818 245 ntBASIC17.53■□□□□ 0.4
SPENQ96T58 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SPENQ96T58 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
SPENQ96T58 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SPENQ96T58 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SPENQ96T58 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPENQ96T58 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SPENQ96T58 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SPENQ96T58 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.52■□□□□ 0.4
SPENQ96T58 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.52■□□□□ 0.4
SPENQ96T58 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.52■□□□□ 0.4
SPENQ96T58 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.52■□□□□ 0.4
SPENQ96T58 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.52■□□□□ 0.4
SPENQ96T58 NEK4P2-201ENST00000580004 1012 ntBASIC17.52■□□□□ 0.4
SPENQ96T58 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SPENQ96T58 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SPENQ96T58 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SPENQ96T58 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SPENQ96T58 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SPENQ96T58 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.52■□□□□ 0.39
SPENQ96T58 AL845331.1-201ENST00000424978 1190 ntBASIC17.52■□□□□ 0.39
SPENQ96T58 ATP5G2P1-201ENST00000433580 426 ntBASIC17.52■□□□□ 0.39
SPENQ96T58 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SPENQ96T58 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.52■□□□□ 0.39
SPENQ96T58 AL353719.1-201ENST00000566847 864 ntBASIC17.52■□□□□ 0.39
SPENQ96T58 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.52■□□□□ 0.39
SPENQ96T58 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SPENQ96T58 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.52■□□□□ 0.39
SPENQ96T58 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.52■□□□□ 0.39
SPENQ96T58 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.51■□□□□ 0.39
SPENQ96T58 AC006128.1-201ENST00000624704 1661 ntBASIC17.51■□□□□ 0.39
SPENQ96T58 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SPENQ96T58 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 AL732292.2-201ENST00000609649 430 ntBASIC17.51■□□□□ 0.39
SPENQ96T58 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.51■□□□□ 0.39
SPENQ96T58 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SPENQ96T58 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SPENQ96T58 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.51■□□□□ 0.39
SPENQ96T58 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.51■□□□□ 0.39
SPENQ96T58 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SPENQ96T58 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.51■□□□□ 0.39
SPENQ96T58 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SPENQ96T58 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.51■□□□□ 0.39
SPENQ96T58 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SPENQ96T58 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SPENQ96T58 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 KRT8P45-201ENST00000414328 1447 ntBASIC17.5■□□□□ 0.39
SPENQ96T58 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SPENQ96T58 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.5■□□□□ 0.39
SPENQ96T58 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.5■□□□□ 0.39
SPENQ96T58 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.5■□□□□ 0.39
SPENQ96T58 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 AL512604.3-201ENST00000569583 964 ntBASIC17.5■□□□□ 0.39
SPENQ96T58 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SPENQ96T58 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
SPENQ96T58 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SPENQ96T58 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPENQ96T58 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 CR769767.2-201ENST00000622735 460 ntBASIC17.5■□□□□ 0.39
SPENQ96T58 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.5■□□□□ 0.39
SPENQ96T58 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SPENQ96T58 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms