Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.1■□□□□ 0.81
NECTIN4Q96NY8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 AP001271.2-201ENST00000624018 1556 ntBASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 GCSHP2-201ENST00000560971 527 ntBASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 AC012313.10-201ENST00000623509 926 ntBASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.09■□□□□ 0.81
NECTIN4Q96NY8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NECTIN4Q96NY8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NECTIN4Q96NY8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NECTIN4Q96NY8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 MIR3652-201ENST00000579335 131 ntBASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 NPAP1P7-201ENST00000613027 823 ntBASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NECTIN4Q96NY8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 PRELID1P1-202ENST00000567272 903 ntBASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.05■□□□□ 0.8
NECTIN4Q96NY8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms