Protein–RNA interactions for Protein: Q96CB9

NSUN4, 5-methylcytosine rRNA methyltransferase NSUN4, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4Q96CB9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN4Q96CB9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 AC092338.2-201ENST00000568827 1415 ntBASIC23.18■■□□□ 1.3
NSUN4Q96CB9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 AC007663.1-201ENST00000438948 1240 ntBASIC23.18■■□□□ 1.3
NSUN4Q96CB9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 AC116562.4-202ENST00000641738 218 ntBASIC23.18■■□□□ 1.3
NSUN4Q96CB9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 ZNF815P-204ENST00000434898 1737 ntBASIC23.18■■□□□ 1.3
NSUN4Q96CB9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NSUN4Q96CB9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 KRT8P11-201ENST00000409686 1436 ntBASIC23.17■■□□□ 1.3
NSUN4Q96CB9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NSUN4Q96CB9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 CCR12P-201ENST00000446203 998 ntBASIC23.16■■□□□ 1.3
NSUN4Q96CB9 AC104076.2-201ENST00000448912 469 ntBASIC23.16■■□□□ 1.3
NSUN4Q96CB9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NSUN4Q96CB9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.15■■□□□ 1.3
NSUN4Q96CB9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms