Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL121672.3-201ENST00000608644 468 ntBASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 SMG8-203ENST00000578922 2178 ntBASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM43Q96BQ3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 AC006128.1-201ENST00000624704 1661 ntBASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 AL022342.1-201ENST00000400363 863 ntBASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 BX276092.5-203ENST00000456199 560 ntBASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 IFNL4P1-201ENST00000607083 540 ntBASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM43Q96BQ3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 AC104692.2-201ENST00000603054 253 ntBASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 AL031008.1-201ENST00000619963 541 ntBASIC21.08■□□□□ 0.97
TRIM43Q96BQ3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.08■□□□□ 0.96
TRIM43Q96BQ3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM43Q96BQ3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM43Q96BQ3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TRIM43Q96BQ3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 AF106564.1-201ENST00000607058 2553 ntBASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 NUS1P1-201ENST00000446295 882 ntBASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 AP002414.4-201ENST00000589764 1148 ntBASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM43Q96BQ3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 AP000593.1-201ENST00000393668 712 ntBASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM43Q96BQ3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms