Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AC023511.2-201ENST00000618803 211 ntBASIC20.85■□□□□ 0.93
HERVK_113Q902F9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HERVK_113Q902F9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HERVK_113Q902F9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HERVK_113Q902F9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HERVK_113Q902F9 KRT8P11-201ENST00000409686 1436 ntBASIC20.85■□□□□ 0.93
HERVK_113Q902F9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.85■□□□□ 0.93
HERVK_113Q902F9 AC007225.1-201ENST00000566331 1836 ntBASIC20.85■□□□□ 0.93
HERVK_113Q902F9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.85■□□□□ 0.93
HERVK_113Q902F9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 NUS1P1-201ENST00000446295 882 ntBASIC20.84■□□□□ 0.93
HERVK_113Q902F9 RASA4DP-201ENST00000460726 1199 ntBASIC20.84■□□□□ 0.93
HERVK_113Q902F9 AC092597.1-201ENST00000487352 616 ntBASIC20.84■□□□□ 0.93
HERVK_113Q902F9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.84■□□□□ 0.93
HERVK_113Q902F9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 AP002383.4-201ENST00000442518 975 ntBASIC20.83■□□□□ 0.93
HERVK_113Q902F9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.83■□□□□ 0.93
HERVK_113Q902F9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.83■□□□□ 0.92
HERVK_113Q902F9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERVK_113Q902F9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERVK_113Q902F9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERVK_113Q902F9 AC006128.1-201ENST00000624704 1661 ntBASIC20.83■□□□□ 0.92
HERVK_113Q902F9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HERVK_113Q902F9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 BX119927.1-201ENST00000636596 1552 ntBASIC20.82■□□□□ 0.92
HERVK_113Q902F9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 AC034232.1-201ENST00000506026 1064 ntBASIC20.82■□□□□ 0.92
HERVK_113Q902F9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 MIR4674-201ENST00000582457 87 ntBASIC20.82■□□□□ 0.92
HERVK_113Q902F9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 AC004263.2-201ENST00000617183 678 ntBASIC20.82■□□□□ 0.92
HERVK_113Q902F9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HERVK_113Q902F9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.81■□□□□ 0.92
HERVK_113Q902F9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.81■□□□□ 0.92
HERVK_113Q902F9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HERVK_113Q902F9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.81■□□□□ 0.92
HERVK_113Q902F9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.81■□□□□ 0.92
HERVK_113Q902F9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HERVK_113Q902F9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AP000593.1-201ENST00000393668 712 ntBASIC20.8■□□□□ 0.92
HERVK_113Q902F9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AC009078.2-202ENST00000463353 338 ntBASIC20.8■□□□□ 0.92
HERVK_113Q902F9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.8■□□□□ 0.92
HERVK_113Q902F9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms