Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTL9Q8NET4 AC092667.1-201ENST00000434301 2586 ntBASIC23.89■■□□□ 1.41
RTL9Q8NET4 AL391422.3-201ENST00000603791 2761 ntBASIC23.89■■□□□ 1.41
RTL9Q8NET4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTL9Q8NET4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTL9Q8NET4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RTL9Q8NET4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.89■■□□□ 1.41
RTL9Q8NET4 AC117947.1-201ENST00000427448 529 ntBASIC23.89■■□□□ 1.41
RTL9Q8NET4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.89■■□□□ 1.41
RTL9Q8NET4 AC063952.2-201ENST00000498792 1227 ntBASIC23.89■■□□□ 1.41
RTL9Q8NET4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.89■■□□□ 1.41
RTL9Q8NET4 MYC-208ENST00000641036 567 ntBASIC23.89■■□□□ 1.41
RTL9Q8NET4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.89■■□□□ 1.41
RTL9Q8NET4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.89■■□□□ 1.41
RTL9Q8NET4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
RTL9Q8NET4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.89■■□□□ 1.41
RTL9Q8NET4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.88■■□□□ 1.41
RTL9Q8NET4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RTL9Q8NET4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.88■■□□□ 1.41
RTL9Q8NET4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RTL9Q8NET4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL9Q8NET4 AK4P3-201ENST00000418260 669 ntBASIC23.88■■□□□ 1.41
RTL9Q8NET4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.87■■□□□ 1.41
RTL9Q8NET4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTL9Q8NET4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL9Q8NET4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL9Q8NET4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL9Q8NET4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL9Q8NET4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 AL358472.4-201ENST00000633140 710 ntBASIC23.86■■□□□ 1.41
RTL9Q8NET4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL9Q8NET4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.86■■□□□ 1.41
RTL9Q8NET4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.85■■□□□ 1.41
RTL9Q8NET4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 AC104417.2-201ENST00000562989 1793 ntBASIC23.85■■□□□ 1.41
RTL9Q8NET4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.85■■□□□ 1.41
RTL9Q8NET4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RTL9Q8NET4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.85■■□□□ 1.41
RTL9Q8NET4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 FAM8A6P-201ENST00000407496 1135 ntBASIC23.85■■□□□ 1.41
RTL9Q8NET4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
RTL9Q8NET4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RTL9Q8NET4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL9Q8NET4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTL9Q8NET4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.84■■□□□ 1.41
RTL9Q8NET4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms