Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 AL390955.1-201ENST00000428694 934 ntBASIC21.95■■□□□ 1.1
RETREG2Q8NC44 KRT18P57-201ENST00000443599 1254 ntBASIC21.95■■□□□ 1.1
RETREG2Q8NC44 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RETREG2Q8NC44 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 AC116351.2-201ENST00000606540 1585 ntBASIC21.94■■□□□ 1.1
RETREG2Q8NC44 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RETREG2Q8NC44 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 CYP2D8P-201ENST00000433633 1490 ntBASIC21.93■■□□□ 1.1
RETREG2Q8NC44 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 AP006587.1-201ENST00000534129 1502 ntBASIC21.93■■□□□ 1.1
RETREG2Q8NC44 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RETREG2Q8NC44 BX119927.1-201ENST00000636596 1552 ntBASIC21.93■■□□□ 1.1
RETREG2Q8NC44 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 AC010947.1-201ENST00000623454 693 ntBASIC21.92■■□□□ 1.1
RETREG2Q8NC44 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RETREG2Q8NC44 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 AL691432.2-201ENST00000607222 2038 ntBASIC21.91■■□□□ 1.1
RETREG2Q8NC44 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.91■■□□□ 1.1
RETREG2Q8NC44 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms