Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCAB3Q8N7B9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 MIR718-201ENST00000390190 70 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 LSM12P1-201ENST00000411836 588 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 ARL4AP4-201ENST00000434170 518 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 UBE2SP1-201ENST00000450587 669 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 AC008550.1-201ENST00000511500 884 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 AP003097.1-201ENST00000530657 1135 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 KRT17P1-201ENST00000399211 1546 ntBASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EFCAB3Q8N7B9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 LETM1P2-201ENST00000597330 2178 ntBASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 HNRNPA1P23-201ENST00000491091 1133 ntBASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 AC060766.1-201ENST00000590824 627 ntBASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 AC005332.8-201ENST00000622750 2735 ntBASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.17■□□□□ 0.66
EFCAB3Q8N7B9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 AC073648.6-201ENST00000641589 218 ntBASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 AC005082.1-201ENST00000413042 2259 ntBASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EFCAB3Q8N7B9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.15■□□□□ 0.66
EFCAB3Q8N7B9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms