Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 FAM197Y1-201ENST00000421178 764 ntBASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 CD177P1-201ENST00000606252 935 ntBASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC33Q8N5R6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 AC018553.1-201ENST00000616682 1458 ntBASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC33Q8N5R6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CCDC33Q8N5R6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC33Q8N5R6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC33Q8N5R6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC33Q8N5R6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC33Q8N5R6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 AL121906.2-201ENST00000621597 723 ntBASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC33Q8N5R6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 AC116562.4-201ENST00000641316 2276 ntBASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 AL353708.3-201ENST00000610272 989 ntBASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC33Q8N5R6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 AC009237.14-201ENST00000609975 1594 ntBASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 AC097493.4-201ENST00000641197 219 ntBASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 TREX1-205ENST00000625293 1783 ntBASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC33Q8N5R6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms