Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
NME8Q8N427 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.33■■□□□ 1.01
NME8Q8N427 INGX-201ENST00000359239 846 ntBASIC21.33■■□□□ 1.01
NME8Q8N427 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
NME8Q8N427 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NME8Q8N427 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
NME8Q8N427 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.33■■□□□ 1.01
NME8Q8N427 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NME8Q8N427 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NME8Q8N427 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NME8Q8N427 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
NME8Q8N427 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.33■■□□□ 1
NME8Q8N427 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
NME8Q8N427 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.33■■□□□ 1
NME8Q8N427 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
NME8Q8N427 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.33■■□□□ 1
NME8Q8N427 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.33■■□□□ 1
NME8Q8N427 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
NME8Q8N427 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.32■■□□□ 1
NME8Q8N427 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.32■■□□□ 1
NME8Q8N427 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.32■■□□□ 1
NME8Q8N427 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 DUX4L26-201ENST00000489078 1255 ntBASIC21.32■■□□□ 1
NME8Q8N427 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NME8Q8N427 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
NME8Q8N427 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
NME8Q8N427 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
NME8Q8N427 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 BX664615.1-201ENST00000443558 458 ntBASIC21.31■■□□□ 1
NME8Q8N427 TSPY17P-201ENST00000450329 467 ntBASIC21.31■■□□□ 1
NME8Q8N427 CA15P1-201ENST00000481698 905 ntBASIC21.31■■□□□ 1
NME8Q8N427 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.31■■□□□ 1
NME8Q8N427 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
NME8Q8N427 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NME8Q8N427 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NME8Q8N427 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.31■■□□□ 1
NME8Q8N427 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.3■■□□□ 1
NME8Q8N427 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NME8Q8N427 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NME8Q8N427 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 AC092667.1-201ENST00000434301 2586 ntBASIC21.3■■□□□ 1
NME8Q8N427 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
NME8Q8N427 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.3■■□□□ 1
NME8Q8N427 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.3■■□□□ 1
NME8Q8N427 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.3■■□□□ 1
NME8Q8N427 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.3■■□□□ 1
NME8Q8N427 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 AL023803.3-201ENST00000615559 522 ntBASIC21.3■■□□□ 1
NME8Q8N427 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.3■■□□□ 1
NME8Q8N427 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.3■■□□□ 1
NME8Q8N427 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
NME8Q8N427 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.29■■□□□ 1
NME8Q8N427 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NME8Q8N427 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.29■■□□□ 1
NME8Q8N427 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.29■■□□□ 1
NME8Q8N427 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NME8Q8N427 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.29■■□□□ 1
NME8Q8N427 AC007663.1-201ENST00000438948 1240 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms