Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SYNPOQ8N3V7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 KRT18P56-201ENST00000507275 550 ntBASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SYNPOQ8N3V7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 KRT126P-201ENST00000549467 1181 ntBASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 AL160286.2-201ENST00000567150 934 ntBASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNPOQ8N3V7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 PCED1CP-201ENST00000419887 785 ntBASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 FAM86EP-206ENST00000510506 987 ntBASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 AC140113.3-201ENST00000605663 199 ntBASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SYNPOQ8N3V7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNPOQ8N3V7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms