Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRTM4Q86VH4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 MIR6786-201ENST00000616843 113 ntBASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRTM4Q86VH4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 B3GAT3P1-201ENST00000471720 806 ntBASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 LINC01465-201ENST00000408887 1940 ntBASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM4Q86VH4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 TREX1-205ENST00000625293 1783 ntBASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 UNC93B2-201ENST00000285383 730 ntBASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM4Q86VH4 AC125437.2-201ENST00000625180 2167 ntBASIC19.02■□□□□ 0.63
LRRTM4Q86VH4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LRRTM4Q86VH4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRTM4Q86VH4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRTM4Q86VH4 RCC2P6-201ENST00000526625 1557 ntBASIC19.02■□□□□ 0.63
LRRTM4Q86VH4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 ZNF815P-204ENST00000434898 1737 ntBASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AC004951.3-201ENST00000418645 1148 ntBASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 RBM17P1-201ENST00000453646 1190 ntBASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AC011506.1-201ENST00000474329 610 ntBASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 Z85996.1-201ENST00000494644 937 ntBASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM4Q86VH4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms