Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 SEC1P-202ENST00000473944 940 ntBASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 AP000867.3-201ENST00000524675 377 ntBASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 AP001005.1-201ENST00000571755 1248 ntBASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 LINC01465-201ENST00000408887 1940 ntBASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RGPD4Q7Z3J3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 TSPY22P-201ENST00000427496 604 ntBASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 AC074051.2-201ENST00000565115 352 ntBASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 AP001271.2-201ENST00000624018 1556 ntBASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 FAM220CP-201ENST00000395253 831 ntBASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 SLC25A1P1-201ENST00000528351 927 ntBASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RGPD4Q7Z3J3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.64■■□□□ 1.54
RGPD4Q7Z3J3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RGPD4Q7Z3J3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RGPD4Q7Z3J3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RGPD4Q7Z3J3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RGPD4Q7Z3J3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
RGPD4Q7Z3J3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 KRT18P58-201ENST00000527480 1120 ntBASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 REXO1L6P-202ENST00000619970 1078 ntBASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 Z98882.1-201ENST00000622160 2253 ntBASIC24.64■■□□□ 1.53
RGPD4Q7Z3J3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 AL353801.3-201ENST00000609898 542 ntBASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 AL773604.1-201ENST00000617417 272 ntBASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 AC079602.3-201ENST00000623931 403 ntBASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RGPD4Q7Z3J3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 AL590627.1-203ENST00000421194 1026 ntBASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
RGPD4Q7Z3J3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms