Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 PRORSD1P-201ENST00000295112 541 ntBASIC20.95■□□□□ 0.94
KRT39Q6A163 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KRT39Q6A163 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.95■□□□□ 0.94
KRT39Q6A163 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT39Q6A163 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT39Q6A163 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT39Q6A163 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT39Q6A163 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT39Q6A163 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT39Q6A163 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT39Q6A163 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT39Q6A163 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT39Q6A163 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT39Q6A163 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT39Q6A163 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT39Q6A163 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT39Q6A163 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
KRT39Q6A163 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT39Q6A163 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.94■□□□□ 0.94
KRT39Q6A163 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT39Q6A163 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
KRT39Q6A163 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT39Q6A163 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.94■□□□□ 0.94
KRT39Q6A163 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 AL359736.2-201ENST00000621992 437 ntBASIC20.94■□□□□ 0.94
KRT39Q6A163 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT39Q6A163 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KRT39Q6A163 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT39Q6A163 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT39Q6A163 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT39Q6A163 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT39Q6A163 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 ABHD17AP1-201ENST00000358206 933 ntBASIC20.93■□□□□ 0.94
KRT39Q6A163 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT39Q6A163 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
KRT39Q6A163 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.93■□□□□ 0.94
KRT39Q6A163 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT39Q6A163 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.93■□□□□ 0.94
KRT39Q6A163 HLA-A-209ENST00000638375 975 ntBASIC20.93■□□□□ 0.94
KRT39Q6A163 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT39Q6A163 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT39Q6A163 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT39Q6A163 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT39Q6A163 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT39Q6A163 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT39Q6A163 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
KRT39Q6A163 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT39Q6A163 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.92■□□□□ 0.94
KRT39Q6A163 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT39Q6A163 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.92■□□□□ 0.94
KRT39Q6A163 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT39Q6A163 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT39Q6A163 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KRT39Q6A163 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
KRT39Q6A163 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT39Q6A163 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
KRT39Q6A163 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
KRT39Q6A163 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
KRT39Q6A163 SDHAP1-207ENST00000440850 2000 ntBASIC20.92■□□□□ 0.94
KRT39Q6A163 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT39Q6A163 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT39Q6A163 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT39Q6A163 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT39Q6A163 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT39Q6A163 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT39Q6A163 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT39Q6A163 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT39Q6A163 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT39Q6A163 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KRT39Q6A163 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT39Q6A163 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT39Q6A163 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KRT39Q6A163 FAM197Y4-202ENST00000622692 608 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms