Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 KRT8P9-201ENST00000558927 1449 ntBASIC19.11■□□□□ 0.65
CDK3Q00526 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.11■□□□□ 0.65
CDK3Q00526 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 AC091390.4-202ENST00000476426 537 ntBASIC19.11■□□□□ 0.65
CDK3Q00526 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK3Q00526 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK3Q00526 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK3Q00526 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.11■□□□□ 0.65
CDK3Q00526 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK3Q00526 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK3Q00526 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK3Q00526 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK3Q00526 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK3Q00526 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.11■□□□□ 0.65
CDK3Q00526 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.11■□□□□ 0.65
CDK3Q00526 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDK3Q00526 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK3Q00526 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK3Q00526 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK3Q00526 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK3Q00526 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK3Q00526 FAM207BP-201ENST00000447172 505 ntBASIC19.1■□□□□ 0.65
CDK3Q00526 AC097488.1-201ENST00000507834 756 ntBASIC19.1■□□□□ 0.65
CDK3Q00526 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK3Q00526 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.1■□□□□ 0.65
CDK3Q00526 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.1■□□□□ 0.65
CDK3Q00526 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CDK3Q00526 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.1■□□□□ 0.65
CDK3Q00526 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CDK3Q00526 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.1■□□□□ 0.65
CDK3Q00526 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDK3Q00526 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK3Q00526 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CDK3Q00526 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK3Q00526 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDK3Q00526 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.09■□□□□ 0.65
CDK3Q00526 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK3Q00526 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 AP005242.2-201ENST00000580065 1175 ntBASIC19.09■□□□□ 0.65
CDK3Q00526 AC012306.2-201ENST00000609350 630 ntBASIC19.09■□□□□ 0.65
CDK3Q00526 AC097493.4-201ENST00000641197 219 ntBASIC19.09■□□□□ 0.65
CDK3Q00526 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK3Q00526 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDK3Q00526 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.09■□□□□ 0.65
CDK3Q00526 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.08■□□□□ 0.65
CDK3Q00526 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK3Q00526 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK3Q00526 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDK3Q00526 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.08■□□□□ 0.64
CDK3Q00526 KRT8P41-201ENST00000533985 1514 ntBASIC19.08■□□□□ 0.64
CDK3Q00526 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDK3Q00526 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.08■□□□□ 0.64
CDK3Q00526 ZNF815P-204ENST00000434898 1737 ntBASIC19.08■□□□□ 0.64
CDK3Q00526 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDK3Q00526 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.07■□□□□ 0.64
CDK3Q00526 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 AC104417.2-201ENST00000562989 1793 ntBASIC19.07■□□□□ 0.64
CDK3Q00526 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDK3Q00526 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 CRYGFP-201ENST00000418459 633 ntBASIC19.07■□□□□ 0.64
CDK3Q00526 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 SLC25A1P4-201ENST00000567977 778 ntBASIC19.07■□□□□ 0.64
CDK3Q00526 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 AC125437.2-201ENST00000625180 2167 ntBASIC19.07■□□□□ 0.64
CDK3Q00526 CYP2D8P-201ENST00000433633 1490 ntBASIC19.07■□□□□ 0.64
CDK3Q00526 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDK3Q00526 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDK3Q00526 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms