Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN17P56750 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN17P56750 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 AC007952.6-201ENST00000573168 2673 ntBASIC17.3■□□□□ 0.36
CLDN17P56750 AC003957.1-201ENST00000625108 2673 ntBASIC17.3■□□□□ 0.36
CLDN17P56750 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN17P56750 PRORSD1P-201ENST00000295112 541 ntBASIC17.3■□□□□ 0.36
CLDN17P56750 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN17P56750 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN17P56750 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN17P56750 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN17P56750 KRT16P5-201ENST00000455284 522 ntBASIC17.3■□□□□ 0.36
CLDN17P56750 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN17P56750 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN17P56750 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN17P56750 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN17P56750 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.3■□□□□ 0.36
CLDN17P56750 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN17P56750 AC093484.2-201ENST00000580996 2166 ntBASIC17.3■□□□□ 0.36
CLDN17P56750 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN17P56750 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN17P56750 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CLDN17P56750 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN17P56750 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN17P56750 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN17P56750 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN17P56750 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 AL359736.2-201ENST00000621992 437 ntBASIC17.29■□□□□ 0.36
CLDN17P56750 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN17P56750 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN17P56750 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN17P56750 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
CLDN17P56750 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CLDN17P56750 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN17P56750 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN17P56750 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN17P56750 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN17P56750 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN17P56750 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN17P56750 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN17P56750 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN17P56750 ZNF815P-204ENST00000434898 1737 ntBASIC17.27■□□□□ 0.36
CLDN17P56750 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN17P56750 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN17P56750 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN17P56750 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDN17P56750 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN17P56750 Z82202.1-201ENST00000623446 1880 ntBASIC17.27■□□□□ 0.36
CLDN17P56750 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN17P56750 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN17P56750 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN17P56750 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN17P56750 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms